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B4LXG8 (B4LXG8_DROVI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length818 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4LXG8 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: C2AB42793B7BD029

FASTA81892,379
        10         20         30         40         50         60 
MIKLLRNCRV SHFTRIRSRG MSSKQARNED NKLDTFRRIC DEIAGEASYL RKVEKLEHFL 

        70         80         90        100        110        120 
KKGSSGSGFK GDLLQWVQFL IPGATQRVYN LQNKALLKLF ARIFHVDQQQ MHLDLEQDGD 

       130        140        150        160        170        180 
ISETLRKHFA SSSKLKPQAQ SKLYLHEVEN MLCQLEQRTK EDEQTEVLQE VCKQATDLDL 

       190        200        210        220        230        240 
RTFIRLIKQD LRINARARHI LDAFGPEAYP AYQSTRDLKL IVENFAGTQG KPKSLKGLPK 

       250        260        270        280        290        300 
AATKSSKKAI GAIQVMTPIS PMLANACKSV EEAFKKNPGG LYSEVKYDGE RVQIHKHGSE 

       310        320        330        340        350        360 
FKFFSRNLKP VVDHKIKELK DYIPRAFPGA NDMILDSEII LVNTKTGELL PFGTLGAHKK 

       370        380        390        400        410        420 
HTYANASVCL FVFDCLLYDG DDLTQLSFCK RREILEQNIK PIKHHVQLSE SQFLKTKNEL 

       430        440        450        460        470        480 
AMMTAKVLQA NLEGVVLKSP EGTYQPGKRN WLKVKKDYLF GGKMADTADL VVLGAWYGSG 

       490        500        510        520        530        540 
KKGGVLSIFL MGCYDARDRL WKTVTKVHSG LDDASNDEVH ESLMKLTERA DASKIPNWLL 

       550        560        570        580        590        600 
CKKALIPDVL AKIPEQMPVW EITGAEFTQS EAHTAAGISI RFPRITRLRS DKSAMQANDL 

       610        620        630        640        650        660 
EHLEQLYAAS KQNVNVDLLL ANCEADRDDA LKNKLKLEKT PQKSKAPKEA TASSSKKPKR 

       670        680        690        700        710        720 
SKSASDDEEV TPSKGRSSRK MHKLEAPTVT SQGNLKDFFK PKIVIADVKI ENPPLASTSS 

       730        740        750        760        770        780 
NYGKGEDRKL FIGLEAHFVA DAAQPKLMDE FVRHGGILAK CTQRASLVFH DCNKNKDLSQ 

       790        800        810 
LRPLYRRSCR HLNIKWLEET LKMKTLQPYP LYALLLQS 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tucson 15010-1051.87.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH940650 Genomic DNA. Translation: EDW67846.1.
RefSeqXP_002054326.1. XM_002054290.1.

3D structure databases

ProteinModelPortalB4LXG8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7244.FBpp0238799.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0240307; FBpp0238799; FBgn0211462.
GeneID6629925.
KEGGdvi:Dvir_GJ24382.

Organism-specific databases

FlyBaseFBgn0211462. Dvir\GJ24382.

Phylogenomic databases

eggNOGCOG1793.
InParanoidB4LXG8.
KOK10776.
OMANEDNKLD.
OrthoDBEOG7BKCT2.
PhylomeDBB4LXG8.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4LXG8_DROVI
AccessionPrimary (citable) accession number: B4LXG8
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)