Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B4LNY6

- B4LNY6_DROVI

UniProt

B4LNY6 - B4LNY6_DROVI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

DNA ligase

Gene

Dvir\GJ20456

Organism
Drosophila virilis (Fruit fly)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Name:Dvir\GJ20456Imported
ORF Names:Dvir_GJ20456Imported, GJ20456Imported
OrganismiDrosophila virilis (Fruit fly)Imported
Taxonomic identifieri7244 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophila
ProteomesiUP000008792: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0207596. Dvir\GJ20456.

Interactioni

Protein-protein interaction databases

STRINGi7244.FBpp0234873.

Structurei

3D structure databases

ProteinModelPortaliB4LNY6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiB4LNY6.
KOiK10747.
OMAiMVKMLEG.
OrthoDBiEOG7RFTGN.
PhylomeDBiB4LNY6.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4LNY6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPPSKITKME LNPEVTEGEG IEIYDPSLES YHPLKHAYWK AERVTPYLAL
60 70 80 90 100
ARTFQVIEET SGRLKMIDIL SNFFCSVMLV SPEDLVPCVY LSINQLAPAY
110 120 130 140 150
EGLELGVAET TLMKAICKAT GRNLAHIKSQ THLTGDLGIV AEQSRVSQRM
160 170 180 190 200
MFRPKPLNVR GVFTKLKEIA KISGQAKMTL VYDVFVACRL SEARFFIRSL
210 220 230 240 250
IGKLRIGIAE QSLLTALAIA LVKRNHINDC KTNKVCDVYK DEIAETTLIL
260 270 280 290 300
KTTFCQCPNY DIIIPAILKY DIKELQERCP MHPGMPLRPM LAQPTKGVLE
310 320 330 340 350
VLERFSGMHI TCEWKYDGER AQIHLNELGE ISIFSRNSEN NTPKYPDLIA
360 370 380 390 400
RSKSFLKTDV QSYIIDSEIV AWDIERKQIL PFQILSTRKR KNVDIEDIKV
410 420 430 440 450
QVCVYIFDLL FINGVSLVTK PLSLRRKMLF EHFQEVEGQW KFATALDTND
460 470 480 490 500
MDEVQQFLEE SIKGNCEGLM VKTLEEEATY EIAKRSRNWL KLKKDYLSNV
510 520 530 540 550
GDSLDLVVIG GYKGKGRRTG TYGGFLLACY DTENEEYQSI CKIGTGFTDD
560 570 580 590 600
DLRLHSEFFN KHVTGSAKSY FRYDPSLEPD VWFEPVQVWE VKCADLSLSP
610 620 630 640 650
IHRASIGIVD AERGISLRFP RFIRIRDDKS PENATDANQV AHMYKSQDQV
660
RNNQKSSSLM DIESDFY
Length:667
Mass (Da):76,143
Last modified:September 23, 2008 - v1
Checksum:i3259275AC55321E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH940648 Genomic DNA. Translation: EDW61155.1.
RefSeqiXP_002049962.1. XM_002049926.1.

Genome annotation databases

EnsemblMetazoaiFBtr0236381; FBpp0234873; FBgn0207596.
GeneIDi6624981.
KEGGidvi:Dvir_GJ20456.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH940648 Genomic DNA. Translation: EDW61155.1 .
RefSeqi XP_002049962.1. XM_002049926.1.

3D structure databases

ProteinModelPortali B4LNY6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7244.FBpp0234873.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai FBtr0236381 ; FBpp0234873 ; FBgn0207596 .
GeneIDi 6624981.
KEGGi dvi:Dvir_GJ20456.

Organism-specific databases

FlyBasei FBgn0207596. Dvir\GJ20456.

Phylogenomic databases

eggNOGi COG1793.
InParanoidi B4LNY6.
KOi K10747.
OMAi MVKMLEG.
OrthoDBi EOG7RFTGN.
PhylomeDBi B4LNY6.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tucson 15010-1051.87Imported.

Entry informationi

Entry nameiB4LNY6_DROVI
AccessioniPrimary (citable) accession number: B4LNY6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 29, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3