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B4LNY6 (B4LNY6_DROVI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length667 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4LNY6 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 3259275AC55321E2

FASTA66776,143
        10         20         30         40         50         60 
MPPSKITKME LNPEVTEGEG IEIYDPSLES YHPLKHAYWK AERVTPYLAL ARTFQVIEET 

        70         80         90        100        110        120 
SGRLKMIDIL SNFFCSVMLV SPEDLVPCVY LSINQLAPAY EGLELGVAET TLMKAICKAT 

       130        140        150        160        170        180 
GRNLAHIKSQ THLTGDLGIV AEQSRVSQRM MFRPKPLNVR GVFTKLKEIA KISGQAKMTL 

       190        200        210        220        230        240 
VYDVFVACRL SEARFFIRSL IGKLRIGIAE QSLLTALAIA LVKRNHINDC KTNKVCDVYK 

       250        260        270        280        290        300 
DEIAETTLIL KTTFCQCPNY DIIIPAILKY DIKELQERCP MHPGMPLRPM LAQPTKGVLE 

       310        320        330        340        350        360 
VLERFSGMHI TCEWKYDGER AQIHLNELGE ISIFSRNSEN NTPKYPDLIA RSKSFLKTDV 

       370        380        390        400        410        420 
QSYIIDSEIV AWDIERKQIL PFQILSTRKR KNVDIEDIKV QVCVYIFDLL FINGVSLVTK 

       430        440        450        460        470        480 
PLSLRRKMLF EHFQEVEGQW KFATALDTND MDEVQQFLEE SIKGNCEGLM VKTLEEEATY 

       490        500        510        520        530        540 
EIAKRSRNWL KLKKDYLSNV GDSLDLVVIG GYKGKGRRTG TYGGFLLACY DTENEEYQSI 

       550        560        570        580        590        600 
CKIGTGFTDD DLRLHSEFFN KHVTGSAKSY FRYDPSLEPD VWFEPVQVWE VKCADLSLSP 

       610        620        630        640        650        660 
IHRASIGIVD AERGISLRFP RFIRIRDDKS PENATDANQV AHMYKSQDQV RNNQKSSSLM 


DIESDFY 

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References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tucson 15010-1051.87.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH940648 Genomic DNA. Translation: EDW61155.1.
RefSeqXP_002049962.1. XM_002049926.1.

3D structure databases

ProteinModelPortalB4LNY6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7244.FBpp0234873.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0236381; FBpp0234873; FBgn0207596.
GeneID6624981.
KEGGdvi:Dvir_GJ20456.

Organism-specific databases

FlyBaseFBgn0207596. Dvir\GJ20456.

Phylogenomic databases

eggNOGCOG1793.
InParanoidB4LNY6.
KOK10747.
OMAMVKMLEG.
OrthoDBEOG7RFTGN.
PhylomeDBB4LNY6.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4LNY6_DROVI
AccessionPrimary (citable) accession number: B4LNY6
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)