Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B4LNY6

- B4LNY6_DROVI

UniProt

B4LNY6 - B4LNY6_DROVI

Protein

DNA ligase

Gene

Dvir\GJ20456

Organism
Drosophila virilis (Fruit fly)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    Name:Dvir\GJ20456Imported
    ORF Names:Dvir_GJ20456Imported, GJ20456Imported
    OrganismiDrosophila virilis (Fruit fly)Imported
    Taxonomic identifieri7244 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophila
    ProteomesiUP000008792: Unassembled WGS sequence

    Organism-specific databases

    FlyBaseiFBgn0207596. Dvir\GJ20456.

    Interactioni

    Protein-protein interaction databases

    STRINGi7244.FBpp0234873.

    Structurei

    3D structure databases

    ProteinModelPortaliB4LNY6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1793.
    InParanoidiB4LNY6.
    KOiK10747.
    OMAiMVKMLEG.
    OrthoDBiEOG7RFTGN.
    PhylomeDBiB4LNY6.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4LNY6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPSKITKME LNPEVTEGEG IEIYDPSLES YHPLKHAYWK AERVTPYLAL    50
    ARTFQVIEET SGRLKMIDIL SNFFCSVMLV SPEDLVPCVY LSINQLAPAY 100
    EGLELGVAET TLMKAICKAT GRNLAHIKSQ THLTGDLGIV AEQSRVSQRM 150
    MFRPKPLNVR GVFTKLKEIA KISGQAKMTL VYDVFVACRL SEARFFIRSL 200
    IGKLRIGIAE QSLLTALAIA LVKRNHINDC KTNKVCDVYK DEIAETTLIL 250
    KTTFCQCPNY DIIIPAILKY DIKELQERCP MHPGMPLRPM LAQPTKGVLE 300
    VLERFSGMHI TCEWKYDGER AQIHLNELGE ISIFSRNSEN NTPKYPDLIA 350
    RSKSFLKTDV QSYIIDSEIV AWDIERKQIL PFQILSTRKR KNVDIEDIKV 400
    QVCVYIFDLL FINGVSLVTK PLSLRRKMLF EHFQEVEGQW KFATALDTND 450
    MDEVQQFLEE SIKGNCEGLM VKTLEEEATY EIAKRSRNWL KLKKDYLSNV 500
    GDSLDLVVIG GYKGKGRRTG TYGGFLLACY DTENEEYQSI CKIGTGFTDD 550
    DLRLHSEFFN KHVTGSAKSY FRYDPSLEPD VWFEPVQVWE VKCADLSLSP 600
    IHRASIGIVD AERGISLRFP RFIRIRDDKS PENATDANQV AHMYKSQDQV 650
    RNNQKSSSLM DIESDFY 667
    Length:667
    Mass (Da):76,143
    Last modified:September 23, 2008 - v1
    Checksum:i3259275AC55321E2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH940648 Genomic DNA. Translation: EDW61155.1.
    RefSeqiXP_002049962.1. XM_002049926.1.

    Genome annotation databases

    EnsemblMetazoaiFBtr0236381; FBpp0234873; FBgn0207596.
    GeneIDi6624981.
    KEGGidvi:Dvir_GJ20456.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH940648 Genomic DNA. Translation: EDW61155.1 .
    RefSeqi XP_002049962.1. XM_002049926.1.

    3D structure databases

    ProteinModelPortali B4LNY6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7244.FBpp0234873.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai FBtr0236381 ; FBpp0234873 ; FBgn0207596 .
    GeneIDi 6624981.
    KEGGi dvi:Dvir_GJ20456.

    Organism-specific databases

    FlyBasei FBgn0207596. Dvir\GJ20456.

    Phylogenomic databases

    eggNOGi COG1793.
    InParanoidi B4LNY6.
    KOi K10747.
    OMAi MVKMLEG.
    OrthoDBi EOG7RFTGN.
    PhylomeDBi B4LNY6.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Evolution of genes and genomes on the Drosophila phylogeny."
      Drosophila 12 genomes consortium
      Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Tucson 15010-1051.87Imported.

    Entry informationi

    Entry nameiB4LNY6_DROVI
    AccessioniPrimary (citable) accession number: B4LNY6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3