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Protein
Submitted name:

GJ13327

Gene

Dvir\GJ13327

Organism
Drosophila virilis (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. zinc ion binding Source: InterPro

GO - Biological processi

  1. protein import into peroxisome matrix Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GJ13327Imported
Gene namesi
Name:Dvir\GJ13327Imported
ORF Names:Dvir_GJ13327Imported, GJ13327Imported
OrganismiDrosophila virilis (Fruit fly)Imported
Taxonomic identifieri7244 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophila
ProteomesiUP000008792 Componenti: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0200552. Dvir\GJ13327.

Subcellular locationi

GO - Cellular componenti

  1. integral component of peroxisomal membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi7244.FBpp0227744.

Family & Domainsi

Keywords - Domaini

Zinc-fingerUniRule annotation

Phylogenomic databases

eggNOGiCOG5574.
InParanoidiB4LHM3.
KOiK13346.
OMAiCILDWLE.
OrthoDBiEOG7C8GHZ.
PhylomeDBiB4LHM3.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR025654. PEX10.
IPR006845. Pex_N.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
PANTHERiPTHR23350. PTHR23350. 1 hit.
PfamiPF04757. Pex2_Pex12. 1 hit.
[Graphical view]
SMARTiSM00184. RING. 1 hit.
[Graphical view]
PROSITEiPS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4LHM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFRNARARQ PEIVRSVQKD ARYTNELAED LSDILRLTGP RNWIKYNQLC
60 70 80 90 100
QLIAQLSYHG FASLNNLQTL GEEYTGIIQV DGKYKHIPSR LLQLVAIILE
110 120 130 140 150
FGGDALFLRV LQKLELHIAE HDEIVPDAKK KLQKLIQYMR QSPSYIKALH
160 170 180 190 200
KSLFYLDAGK YQVSKRVTGI NYVLIRHWLQ PEFSLYGYKI LGIITFLQVT
210 220 230 240 250
VSLAIGGWEA WKEHKRQQLE ALKQATKGFL QRETSTKPLS VDVPQCILCL
260 270 280 290
EPRQSASLTP CGHLFCWSCI LDWLEERDEC PLCRESLKKS QVIQLQNYV
Length:299
Mass (Da):34,589
Last modified:September 22, 2008 - v1
Checksum:iFB4C67FFD8827456
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH940647 Genomic DNA. Translation: EDW69576.1.
RefSeqiXP_002047234.1. XM_002047198.1.

Genome annotation databases

EnsemblMetazoaiFBtr0229252; FBpp0227744; FBgn0200552.
GeneIDi6622689.
KEGGidvi:Dvir_GJ13327.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH940647 Genomic DNA. Translation: EDW69576.1.
RefSeqiXP_002047234.1. XM_002047198.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7244.FBpp0227744.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0229252; FBpp0227744; FBgn0200552.
GeneIDi6622689.
KEGGidvi:Dvir_GJ13327.

Organism-specific databases

FlyBaseiFBgn0200552. Dvir\GJ13327.

Phylogenomic databases

eggNOGiCOG5574.
InParanoidiB4LHM3.
KOiK13346.
OMAiCILDWLE.
OrthoDBiEOG7C8GHZ.
PhylomeDBiB4LHM3.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR025654. PEX10.
IPR006845. Pex_N.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
PANTHERiPTHR23350. PTHR23350. 1 hit.
PfamiPF04757. Pex2_Pex12. 1 hit.
[Graphical view]
SMARTiSM00184. RING. 1 hit.
[Graphical view]
PROSITEiPS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tucson 15010-1051.87Imported.

Entry informationi

Entry nameiB4LHM3_DROVI
AccessioniPrimary (citable) accession number: B4LHM3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2008
Last sequence update: September 22, 2008
Last modified: January 6, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.