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B4KSB4 (B4KSB4_DROMO) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length494 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. SAAS SAAS006589

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B4KSB4 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 8D583F96C64E8860

FASTA49454,057
        10         20         30         40         50         60 
MFLTKALLAV AFLALVNAQY WHNYKSGRNG MVHLFEWKWD DIAAECENFL GPYGFGGVQV 

        70         80         90        100        110        120 
SPVNENAVIG SRPWWERYQP ISYKLSTRSG NEQQFASMVR RCNDAGVRIY VDVVFNHMAA 

       130        140        150        160        170        180 
DGGTSGTGGS TADPGSKSFP GVPFSSLDFN PTCAITNYAD PTNVRNCELV GLRDLNQGNS 

       190        200        210        220        230        240 
YVRDKIVDFL NHLTDLGVAG FRVDAAKHMW PGDLQAIYSR LNNLNTAHGF SSGARPYIFQ 

       250        260        270        280        290        300 
EVIDLGNEAI SKSEYTGLGA VTEFRHSDSI GKVFRGKDQL RYLNNWGTAW GFADSDASLV 

       310        320        330        340        350        360 
FVDNHDNQRG HGAGGADVLT YKVPKQYKMA SAFMLAHPFG TPRVMSSFAF DNTDQGPPTT 

       370        380        390        400        410        420 
DGHNIASPIF NSDMSCGGGW VCEHRWRQIY NMVGFRNAVG DARLQNWWDN GSNQIAFSRG 

       430        440        450        460        470        480 
SEGFVAFNND NYDLNSSLQT GLPAGTYCDV ISGFKSGSSC TGKTIQVGSD GRANIYIGTS 

       490 
EEDGVVAIHV NAKL 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tucson 15081-1352.22.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH933808 Genomic DNA. Translation: EDW08396.1.
RefSeqXP_002004461.1. XM_002004425.1.

3D structure databases

ProteinModelPortalB4KSB4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0170671; FBpp0169163; FBgn0142683.
GeneID6578551.
KEGGdmo:Dmoj_GI19946.

Organism-specific databases

FlyBaseFBgn0142683. Dmoj\GI19946.

Phylogenomic databases

InParanoidB4KSB4.
KOK01176.
OrthoDBEOG7RJPR2.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB4KSB4_DROMO
AccessionPrimary (citable) accession number: B4KSB4
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)