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Protein

Alpha-amylase

Gene

Amyrel

Organism
Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseSAAS annotation (EC:3.2.1.1SAAS annotation)
Gene namesi
Name:AmyrelImported
Synonyms:Dgri\AmyrelImported
ORF Names:Dgri_GH22708Imported, GH22708Imported
OrganismiDrosophila grimshawi (Fruit fly) (Idiomyia grimshawi)Imported
Taxonomic identifieri7222 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaHawaiian Drosophila
ProteomesiUP000001070 Componenti: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0083757. Dgri\Amyrel.

Interactioni

Protein-protein interaction databases

STRINGi7222.FBpp0156614.

Structurei

3D structure databases

ProteinModelPortaliB4JWN1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
InParanoidiB4JWN1.
KOiK01176.
OMAiESMPSER.
OrthoDBiEOG7RJPR2.
PhylomeDBiB4JWN1.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B4JWN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRLTLVCLL ATLALAQHNP QWWGNRNTIV HLFEWKWDDI AQECEDFLAP
60 70 80 90 100
HGYAGIQVSP VAENIISEGR PWWERYQPIS YKLLTRSGNE LEFASMVRRC
110 120 130 140 150
NDVGVRIYVD VLLNHMSGDF PGTAHGTGGS VAEPSTKSFP AVPYTTTDFH
160 170 180 190 200
PSCEIFDWND RFQVQQCELV GLKDLDQSKA YVRDKLIEVL DHLITLGVAG
210 220 230 240 250
FRVDAAKHMA ADDLRVIFNS MRDLNTDHGF PNGARPFIYQ EVIDHGHETV
260 270 280 290 300
SRDEYTDLGA VTEFRVSEEI GKAFRGNNAL KWLQSWGESW GFLPSNQALT
310 320 330 340 350
FVDNHDNQRD GGQELNYKSA KQYKMATAFH LAFPYGISQV MSSFDFDNRD
360 370 380 390 400
QAPPQDSQER IISPEFDADG ACTNGWVCEH RWRQIYNMVG FKNAVRGTHF
410 420 430 440 450
NNWWDNGNNQ IAFCRGSKGF VAFNNDNYDL SEILKTCLPA GKYCDVISGN
460 470 480 490
LINGSCTGKT VSVDNNGYGH ISILANEFDG VLALHADAKL
Length:490
Mass (Da):55,215
Last modified:September 23, 2008 - v1
Checksum:iE5A29D66F652FFDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH916375 Genomic DNA. Translation: EDV98369.1.
RefSeqiXP_001995297.1. XM_001995261.1.

Genome annotation databases

EnsemblMetazoaiFBtr0158122; FBpp0156614; FBgn0083757.
GeneIDi6569117.
KEGGidgr:Dgri_GH22708.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH916375 Genomic DNA. Translation: EDV98369.1.
RefSeqiXP_001995297.1. XM_001995261.1.

3D structure databases

ProteinModelPortaliB4JWN1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7222.FBpp0156614.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0158122; FBpp0156614; FBgn0083757.
GeneIDi6569117.
KEGGidgr:Dgri_GH22708.

Organism-specific databases

FlyBaseiFBgn0083757. Dgri\Amyrel.

Phylogenomic databases

eggNOGiCOG0366.
InParanoidiB4JWN1.
KOiK01176.
OMAiESMPSER.
OrthoDBiEOG7RJPR2.
PhylomeDBiB4JWN1.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Tucson 15287-2541.00Imported.

Entry informationi

Entry nameiB4JWN1_DROGR
AccessioniPrimary (citable) accession number: B4JWN1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 22, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.