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Protein
Submitted name:

GH12110

Gene

Dgri\GH12110

Organism
Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi978 – 1053Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GH12110Imported
Gene namesi
Name:Dgri\GH12110Imported
ORF Names:Dgri_GH12110Imported, GH12110Imported
OrganismiDrosophila grimshawi (Fruit fly) (Idiomyia grimshawi)Imported
Taxonomic identifieri7222 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaHawaiian Drosophila
Proteomesi
  • UP000001070 Componenti: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0119589. Dgri\GH12110.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi7222.FBpp0146016.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini978 – 1053Nuclear receptorInterPro annotationAdd BLAST76

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili363 – 400Sequence analysisAdd BLAST38
Coiled coili618 – 645Sequence analysisAdd BLAST28
Coiled coili797 – 859Sequence analysisAdd BLAST63
Coiled coili1073 – 1103Sequence analysisAdd BLAST31

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3575. Eukaryota.
ENOG410XRZC. LUCA.
InParanoidiB4JK60.
KOiK09185.
OMAiDMRARPH.
OrthoDBiEOG091G06RA.
PhylomeDBiB4JK60.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
2.130.10.10. 2 hits.
3.30.50.10. 1 hit.
InterProiView protein in InterPro
IPR011989. ARM-like.
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001723. Nuclear_hrmn_rcpt.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
PfamiView protein in Pfam
PF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
PRINTSiPR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTiView protein in SMART
SM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
SUPFAMiSSF48508. SSF48508. 2 hits.
PROSITEiView protein in PROSITE
PS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

B4JK60-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLSRGPYSE LDKMSLFQDL KLKRRKIDSR CSSDGESIAD TSTSSPDLLA
60 70 80 90 100
PMSPKLCDSG TAPSLPPLPL PLNALPSVTV TTSAASTSAA AAAAVSTSTT
110 120 130 140 150
TSSSSSAAVA AAAAAAAASA TAAAAATTVT AAATSAAATS STPSSCSSST
160 170 180 190 200
ITITATATAK AATAAAAAAA AAAATAAAAS TSTEAAVAAA AAAAAALNQN
210 220 230 240 250
IGSAGGSKHQ QTEIHSSSNA ITAAAASTVM SPPPAELQRA TSPLLAVGVA
260 270 280 290 300
GVAASVAGEA LSLALNSRGT PTPPHNNGGA SSSSNGSSRA SPDSLEEKPS
310 320 330 340 350
TTTGRGSSTP TNGLLANSNN SSSTSSSINI SNKINSSTSS NLSVIRSVKE
360 370 380 390 400
ERILASPTKM LAYHQQQQQQ QQQQREREHR ERERERERER ERERERERDR
410 420 430 440 450
ELKAASGHGH VTVLVTPSRI KAEPPPPSSP SSTTTQRDRE RDRERDRDRD
460 470 480 490 500
RDRDLGSSSS ISSSQQQQQQ QQQLQQQQQQ THISRSSPPM GQHLGHAYGH
510 520 530 540 550
PHAHLGGHSG SSIVQTHHLH QQLTQPLTLR KNSPPQELQL PHLTMQSMQQ
560 570 580 590 600
LTQQQLTQQQ LHLHHLLGQQ QQQQQHQQQQ QQQQQQQQHS PHALIRVKKE
610 620 630 640 650
PTSSGSAQQQ RHLSPHHHQQ QQQQHQQHQQ QQQQQQQQQQ QQQQQHHHQQ
660 670 680 690 700
QQQQQQSLLH SASLQSLRHP SRDAAILFRV KSEVQQQVAV AAAAAASSSL
710 720 730 740 750
PHLMQPTAAA AAAAAAAAAA HRMVCFSNAR INGVKPEVIG GPLCPSPHPS
760 770 780 790 800
SSSSASSQLS PQTPSQTPPR GTPTVIMGES CGVRTMVWGY EPPPPSANQQ
810 820 830 840 850
QQQHQQQQQQ QQHQQQQHQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQHQQQQ
860 870 880 890 900
QQQQQQQQQQ LCLQTASSSP STGSITPTHT PGPPAVGPQN NEEAAQLLLS
910 920 930 940 950
LGQTRIQDMR PRPHQFRTPH ALNMERLWAG DYSQLPPGQL QALNLSAQQQ
960 970 980 990 1000
WGSSNSNSSG SGRSLEAPHE PTDEDDQPLV CMICEDKATG LHYGIITCEG
1010 1020 1030 1040 1050
CKGFFKRTVQ NRRVYTCVAD GTCEITKAQR NRCQYCRFKK CIEQGMVLQA
1060 1070 1080 1090 1100
VREDRMPGGR NSGAVYNLYK VKYKKHKKTN QKQQQQQQQQ QQQQQQQQQQ
1110 1120 1130 1140 1150
QQQMLSPIHH HHGAGGHGHP AQLSPHHLLS PQQQQLAAAV AAAAQHQHQQ
1160 1170 1180 1190 1200
SKLLAAGHGG AGDMKPMFLG PVLKVEHLQQ PSMHSPAQQQ QHQQQQQQQQ
1210 1220 1230 1240 1250
QHQQQQQQPQ SSPHLSLSSP HHAPPPPPNA SQQQQQQQQH HNHHQQQQQQ
1260 1270 1280 1290 1300
QQQQQQQTSL PAHLMNGTIL KTALTNPSEI VHLRHRLDSA VSSSKDRQIS
1310 1320 1330 1340 1350
YEHALSMIQT LIDCDAMEDI ATLPHFSEFL EDKSEISEKL CNIGDSIVHK
1360 1370 1380 1390 1400
LVSWTKKLPF YLEIPVEIHT KLLTDKWHEI LILTTAAYQA LHGKRSTSAT
1410 1420 1430 1440 1450
TPAISAGSAA AGVAGGGGSG GGGGGGGGGG ATSPNNHNSN RHGSPAPTST
1460 1470 1480 1490 1500
PTASQLPMPL HKDDPEFVSE VNSHLSTLQT CLTTLMGQPI AMEQLKLDVG
1510 1520 1530 1540 1550
HMVDKMTQIT IMFRRIKLKM EEYVCLKVYI LLNKEVELES IQERYIQVLR
1560 1570 1580 1590 1600
SYLQSSSPQN PQARLSELLS HIPEIQAAAS LLLESKMFYV PFVLNSASIR
Length:1,600
Mass (Da):173,884
Last modified:September 23, 2008 - v1
Checksum:iB693245891912C6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH916370 Genomic DNA. Translation: EDV99962.1.
RefSeqiXP_001991338.1. XM_001991302.1.

Genome annotation databases

EnsemblMetazoaiFBtr0147524; FBpp0146016; FBgn0119589.
GeneIDi6564762.
KEGGidgr:Dgri_GH12110.

Similar proteinsi

Entry informationi

Entry nameiB4JK60_DROGR
AccessioniPrimary (citable) accession number: B4JK60
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 27, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported