B4JI72 (B4JI72_DROGR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GH18547 EMBL EDV92953.1

Gene names

Name:	GH18547 FlyBase FBgn0126014
Synonyms:	Dgri\GH18547 EMBL EDV92953.1
ORF Names:	Dgri_GH18547 EMBL EDV92953.1

Organism

Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi) [Complete proteome]

Taxonomic identifier

7222 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Eremoneura › Cyclorrhapha › Schizophora › Acalyptratae › Ephydroidea › Drosophilidae › Drosophilinae › Drosophilini › Drosophilina › Drosophiliti › Drosophila › Hawaiian Drosophila › picture wing clade › grimshawi clade › grimshawi group › grimshawi subgroup

Protein attributes

Sequence length	930 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003532 SAAS SAAS011047 WD repeat RuleBase RU000362 SAAS SAAS011047
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	rRNA processing Inferred from electronic annotation. Source: InterPro
Cellular_component	small-subunit processome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4JI72 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 9765A7A6064274DE	FASTA	930	103,586
	10 20 30 40 50 60 MTHLKEEDTS AVADEQEARG VIKESSQIFR RNRALGYVSN QVPAVTRYVQ RRRDTLLITC 70 80 90 100 110 120 IGRSFQVYTA SHFRLLHVSG LHPDDITAMA TDRLHTYTAS NKCIYAWRAG KHIRHVYRGH 130 140 150 160 170 180 ERDVHLLLPF GRSLIAVDHS NVLKVWNIPT DDVYLDVPFK SDEFRITALA HPPTYVNKIV 190 200 210 220 230 240 LGSQQGQLKI MNIKKNSIVC TLSHHDCGIT CIEPAPALDV VAIGHADGTI IVLNLKYDTV 250 260 270 280 290 300 LVAFKQEWGL VTGLTFRTDG PPILVSACRN GYMAFWNLEE HKLAGQLQAH EEQVATAICL 310 320 330 340 350 360 PSEPVVFTTS PDNSMKLFVF DMPDGGARQL RIREGHTKPP LCIRYHGGSG VSILSSGEDS 370 380 390 400 410 420 TLRVFSTISE SLNKSMGRAT YNQKATKKKN RFQYDKYGMP PIVEFTSDVA REKEWDNIAA 430 440 450 460 470 480 IHSGIIQTTT WTFNKNRMGE HRLVPTQFQN KQRSNFQCET TCIILTHCGN FVIIGYSSGD 490 500 510 520 530 540 VERFNIQSGL HRCSYGAPKA AHESAVRGLA SDNLNQYVVT GCSSGLVKFW TFKGKTERPI 550 560 570 580 590 600 AVLRLADGVA LMRHHRESAM LAIGLDTFKV YVVDMATRVV VRKFIGHTAK LNDLAFSPDS 610 620 630 640 650 660 RWLITAAMDS TIKVWDIPSS YMIDHFRVER PCISLSMSPS GDFLATAHVN LLGIYLWSNK 670 680 690 700 710 720 TLFSQISLRS MDPHEPAPYV GLPANVCDAM ELEDAMQELG IDSSNEQNAE LGEEINAKYE 730 740 750 760 770 780 TPKQLAPELI TLSGLAASRW QNLLDLQLIK QRNKPKAPPK VPKQAPFFLP TVSGLELRFD 790 800 810 820 830 840 VANGAPSATD GSRIQQVSAL NNLTAFGKLL ETTATSNDFD AACKHITQLG PSMVDFEIKS 850 860 870 880 890 900 LHPEAGGTLL AMLQFLKLIE FMFSTNLDFE LAQSYLSVYL RSHGLSLSES PEIVQSLRSV 910 920 930 SQAQQLAWER VESKLIYGIG VVSALRNFAR

References

[1]	"Evolution of genes and genomes on the Drosophila phylogeny." Drosophila 12 genomes consortium Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tucson 15287-2541.00.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH916369 Genomic DNA. Translation: EDV92953.1.
RefSeq	XP_001989891.1. XM_001989855.1.
3D structure databases
ProteinModelPortal	B4JI72.
ModBase	Search...
Protein-protein interaction databases
STRING	7222.FBpp0152453.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0153961; FBpp0152453; FBgn0126014.
GeneID	6563797.
KEGG	dgr:Dgri_GH18547.
Organism-specific databases
FlyBase	FBgn0126014. Dgri\GH18547.
Phylogenomic databases
eggNOG	COG2319.
InParanoid	B4JI72.
KO	K14554.
OMA	DGIIACH.
OrthoDB	EOG4KD521.
Family and domain databases
Gene3D	2.130.10.10. 2 hits.
InterPro	IPR011047. Quinonprotein_ADH-like_supfam. IPR007319. SSU_processome_Utp21. IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR019775. WD40_repeat_CS. IPR017986. WD40_repeat_dom. [Graphical view]
Pfam	PF04192. Utp21. 1 hit. PF00400. WD40. 4 hits. [Graphical view]
SMART	SM00320. WD40. 9 hits. [Graphical view]
SUPFAM	SSF50998. Quin_alc_DH_like. 1 hit. SSF50978. WD40_like. 1 hit.
PROSITE	PS00678. WD_REPEATS_1. 2 hits. PS50082. WD_REPEATS_2. 1 hit. PS50294. WD_REPEATS_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B4JI72_DROGR

Accession

Primary (citable) accession number: B4JI72

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	April 3, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)