B4J6Q4 (B4J6Q4_DROGR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GH20727 EMBL EDW00957.1

Gene names

Name:	GH20727 FlyBase FBgn0128190
Synonyms:	Dgri\GH20727 EMBL EDW00957.1
ORF Names:	Dgri_GH20727 EMBL EDW00957.1

Organism

Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi) [Complete proteome]

Taxonomic identifier

7222 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Eremoneura › Cyclorrhapha › Schizophora › Acalyptratae › Ephydroidea › Drosophilidae › Drosophilinae › Drosophilini › Drosophilina › Drosophiliti › Drosophila › Hawaiian Drosophila › picture wing clade › grimshawi clade › grimshawi group › grimshawi subgroup

Protein attributes

Sequence length	769 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity	ATP + H2O = ADP + phosphate.
Sequence similarities	Contains 1 helicase ATP-binding domain. SAAS SAAS013020

Ontologies

Keywords
Cellular component	Nucleus SAAS SAAS014013
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase SAAS SAAS013020 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nucleotide-excision repair Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent DNA helicase activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4J6Q4 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: D5CD3F438EFAFE85	FASTA	769	87,880
	10 20 30 40 50 60 MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM 70 80 90 100 110 120 IEHPERIRKL IYCSRTVPEI EKVIAELQNL MVYYDKHAHT PPGMTGLVLS SRKNMCIHPE 130 140 150 160 170 180 VSKEREGKAV DGKCYGLTAS YIRERHEMDA EVPICQYFEG FTLEGKESTL PVGIYSIDDL 190 200 210 220 230 240 KEYGRSRNWC PYFTARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMTRESC VVFDEAHNID 250 260 270 280 290 300 NVCIDSMSVK INRRTVERST NALNNLTKLV QDMRDEDTNR LNEEYQRMVQ GLKDASVQRD 310 320 330 340 350 360 TDMILANPVL PKDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD 370 380 390 400 410 420 VSSKICIERK PLRFCAERLS SLLRTLEISD MTEFGALTLI THFATLVSTY TKGFTIIIEP 430 440 450 460 470 480 FDDKTPTVSN PIMHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS 490 500 510 520 530 540 FTMTLARPCL LPMIVSKGND QVSISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT 550 560 570 580 590 600 SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA 610 620 630 640 650 660 RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA 670 680 690 700 710 720 AQCVGRALRG KTDYGIMIFA DKRFSRQDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW 730 740 750 760 LRRMAQPFSR EVQLGISLLT LAQLEGMEQE KLERQAQGKQ GVGGEVQEL

References

[1]	"Evolution of genes and genomes on the Drosophila phylogeny." Drosophila 12 genomes consortium Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tucson 15287-2541.00.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH916367 Genomic DNA. Translation: EDW00957.1.
RefSeq	XP_001986090.1. XM_001986054.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7222.FBpp0154633.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0156141; FBpp0154633; FBgn0128190.
GeneID	6560968.
KEGG	dgr:Dgri_GH20727.
Organism-specific databases
FlyBase	FBgn0128190. Dgri\GH20727.
Phylogenomic databases
eggNOG	COG1199.
InParanoid	B4J6Q4.
KO	K10844.
OMA	KDVDGKC.
OrthoDB	EOG4FTTFK.
Family and domain databases
InterPro	IPR006555. ATP-dep_Helicase_C. IPR010614. DEAD_2. IPR002464. DNA/RNA_helicase_DEAH_CS. IPR013020. DNA_helicase_DNA-repair_Rad3. IPR010643. DUF1227. IPR014013. Helic_SF1/SF2_ATP-bd_DinG/Rad3. IPR006554. Helicase-like_DEXD_c2. IPR001945. XPGD_DNA_repair. [Graphical view]
Pfam	PF06733. DEAD_2. 1 hit. PF06777. DUF1227. 1 hit. PF13307. Helicase_C_2. 1 hit. [Graphical view]
PRINTS	PR00852. XRODRMPGMNTD.
SMART	SM00488. DEXDc2. 1 hit. SM00491. HELICc2. 1 hit. [Graphical view]
TIGRFAMs	TIGR00604. rad3. 1 hit.
PROSITE	PS00690. DEAH_ATP_HELICASE. 1 hit. PS51193. HELICASE_ATP_BIND_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B4J6Q4_DROGR

Accession

Primary (citable) accession number: B4J6Q4

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	April 3, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)