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B4IG48 (B4IG48_DROSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length671 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4IG48 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: CBEB9BF915EC8D30

FASTA67176,915
        10         20         30         40         50         60 
MYRDYGDVVY SVLKPRCFNP PSNLRLNQIH QMLDTIANED TEVKQQQLIC FTEQASPEEQ 

        70         80         90        100        110        120 
KWLIRLLLKS LGLGIGEQKI FGVLHPKAQD IYQRCSDLGH VCNLLADQTT DLDASTSKDS 

       130        140        150        160        170        180 
KAAVKFVNLN SVIRPFHQIR PMLCERFPGD IQELMQSDVL YLETKMDGER FQLHIDRGRF 

       190        200        210        220        230        240 
MYFSRNGVDY TRNFGHSYDH GTLTPKLRGL LPLGLESIIL DGEMMVWDTN KLRFREKGEN 

       250        260        270        280        290        300 
TDVKSLKPEG SWQPCFVVYD LLYFNGKSLL DHTYIQRAYK LQKLIVEQSG VLQLMRARKI 

       310        320        330        340        350        360 
GSVQEFNELF QQALDSHAEG IVLKKQGSRY QPGVRLGGGW YKDKADYIKG LITEFDVLII 

       370        380        390        400        410        420 
GAFYNRKRTF VDSFLLGVLQ PAPPGSSNRP EVFSIGVVAN NTKQRGVLNH TLKPHWHDVV 

       430        440        450        460        470        480 
NEPPPLWFHY KPKERAGCPD LWIEPQNSVI LQVKAADLAP NGAFFTRKSL HFPRTEMKRD 

       490        500        510        520        530        540 
DKPWSECMTL KEFNDLCQGP LAIKKLNKRQ LRLEDVTTKR KQMRMTPSER SRLGLAVYEK 

       550        560        570        580        590        600 
RYDASTSAST SKLFDGLSFC ILSGSAGRHS KHQLQELAVK NGGCIVENPL PNDPKCFCIA 

       610        620        630        640        650        660 
GDETFLVKRL ILQQPRTCDI VRMEWLLRVC QKQELELRPR DLIAATEPLQ QDLAECFDQH 

       670 
GDSYTKDIAQ R 

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References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Rob3c / Tucson 14021-0248.25.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH480835 Genomic DNA. Translation: EDW48782.1.
RefSeqXP_002042708.1. XM_002042672.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0200584; FBpp0199076; FBgn0172507.
GeneID6618438.
KEGGdse:Dsec_GM17599.

Organism-specific databases

FlyBaseFBgn0172507. Dsec\GM17599.

Phylogenomic databases

KOK10777.
OrthoDBEOG7BKCT2.
PhylomeDBB4IG48.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4IG48_DROSE
AccessionPrimary (citable) accession number: B4IG48
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)