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B4IG48

- B4IG48_DROSE

UniProt

B4IG48 - B4IG48_DROSE

Protein
Submitted name:

GM17599

Gene

Dsec\GM17599

Organism
Drosophila sechellia (Fruit fly)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro
    3. DNA replication Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    GM17599Imported
    Gene namesi
    Name:Dsec\GM17599Imported
    ORF Names:Dsec_GM17599Imported, GM17599Imported
    OrganismiDrosophila sechellia (Fruit fly)Imported
    Taxonomic identifieri7238 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
    ProteomesiUP000001292: Unassembled WGS sequence

    Organism-specific databases

    FlyBaseiFBgn0172507. Dsec\GM17599.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7BKCT2.
    PhylomeDBiB4IG48.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4IG48-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYRDYGDVVY SVLKPRCFNP PSNLRLNQIH QMLDTIANED TEVKQQQLIC    50
    FTEQASPEEQ KWLIRLLLKS LGLGIGEQKI FGVLHPKAQD IYQRCSDLGH 100
    VCNLLADQTT DLDASTSKDS KAAVKFVNLN SVIRPFHQIR PMLCERFPGD 150
    IQELMQSDVL YLETKMDGER FQLHIDRGRF MYFSRNGVDY TRNFGHSYDH 200
    GTLTPKLRGL LPLGLESIIL DGEMMVWDTN KLRFREKGEN TDVKSLKPEG 250
    SWQPCFVVYD LLYFNGKSLL DHTYIQRAYK LQKLIVEQSG VLQLMRARKI 300
    GSVQEFNELF QQALDSHAEG IVLKKQGSRY QPGVRLGGGW YKDKADYIKG 350
    LITEFDVLII GAFYNRKRTF VDSFLLGVLQ PAPPGSSNRP EVFSIGVVAN 400
    NTKQRGVLNH TLKPHWHDVV NEPPPLWFHY KPKERAGCPD LWIEPQNSVI 450
    LQVKAADLAP NGAFFTRKSL HFPRTEMKRD DKPWSECMTL KEFNDLCQGP 500
    LAIKKLNKRQ LRLEDVTTKR KQMRMTPSER SRLGLAVYEK RYDASTSAST 550
    SKLFDGLSFC ILSGSAGRHS KHQLQELAVK NGGCIVENPL PNDPKCFCIA 600
    GDETFLVKRL ILQQPRTCDI VRMEWLLRVC QKQELELRPR DLIAATEPLQ 650
    QDLAECFDQH GDSYTKDIAQ R 671
    Length:671
    Mass (Da):76,915
    Last modified:September 23, 2008 - v1
    Checksum:iCBEB9BF915EC8D30
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH480835 Genomic DNA. Translation: EDW48782.1.
    RefSeqiXP_002042708.1. XM_002042672.1.

    Genome annotation databases

    EnsemblMetazoaiFBtr0200584; FBpp0199076; FBgn0172507.
    GeneIDi6618438.
    KEGGidse:Dsec_GM17599.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH480835 Genomic DNA. Translation: EDW48782.1 .
    RefSeqi XP_002042708.1. XM_002042672.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai FBtr0200584 ; FBpp0199076 ; FBgn0172507 .
    GeneIDi 6618438.
    KEGGi dse:Dsec_GM17599.

    Organism-specific databases

    FlyBasei FBgn0172507. Dsec\GM17599.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7BKCT2.
    PhylomeDBi B4IG48.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Evolution of genes and genomes on the Drosophila phylogeny."
      Drosophila 12 genomes consortium
      Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Rob3c / Tucson 14021-0248.25Imported.

    Entry informationi

    Entry nameiB4IG48_DROSE
    AccessioniPrimary (citable) accession number: B4IG48
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3