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B4GCY0 (B4GCY0_DROPE) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length744 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4GCY0 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: D36BE18D3D46F90C

FASTA74484,566
        10         20         30         40         50         60 
MQQSITSYFK QKSDVPESPG KARPVSKIKS EVDLAENEPK IKREDETSEA NIEANRIIDP 

        70         80         90        100        110        120 
NPSIIEAMEI KEEPTSKVER KVTTIGLNST SKDNKEEVEN YDPSNEAYHP LEHAYWKAKA 

       130        140        150        160        170        180 
VTPYLALART FQVIEETKGR LKMIDTLSNF FSSVMLVSPN DLLPSVYLSI NQLAPAYEGL 

       190        200        210        220        230        240 
ELGVAETTLM KAICKATGRN LAHIKSQTHL TGDLGIVAEQ SRVSQRMMFQ PAPLNIRGVF 

       250        260        270        280        290        300 
NKLREIAKIS GQSKMTLVYD VFVACRSSEA RFFIRSLIGK LRIGIAEQSL LTALAIALVK 

       310        320        330        340        350        360 
KNHINDCKVS KIVDVYKDEI TETTLLLKTA YSQCPNYDII IPAILKYDIK ELQERCPMHP 

       370        380        390        400        410        420 
GMPLRPMLAQ PTKGVHEVFE RFGSMHITCE WKYDGERAQI HCNERGEISI FSRNSENNTA 

       430        440        450        460        470        480 
KYPDLIARSK GFLKGAVQSY IIDSEIVAWD VERKQILPFQ VLSTRKRKNV DIEEIKVQVC 

       490        500        510        520        530        540 
VYIFDLLYIN GTTLVTSPLS ERRKLLLEHF QEVEGEWKFA TALDTNDIDE VQQFLEESVK 

       550        560        570        580        590        600 
GNCEGLMVKT LDEEATYEIA KRSRNWLKLK KDYLSNVGDS LDLVVIGGYK GKGRRTGTYG 

       610        620        630        640        650        660 
GFLLACYDTE NEEYQSICKI GTGFTDEDLR IHSEFLGKHV IPSAKSYFRY DSSLEPDHWF 

       670        680        690        700        710        720 
EPAQVWEVKC ADLSLSPIHR AAIGIVDTER GISLRFPRFI RIRDDKSSEN ATDANQVAHM 

       730        740 
YQSQDQVKNN QRTCTQMDME SEFY 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MSH-3 / Tucson 14011-0111.49.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH479181 Genomic DNA. Translation: EDW31518.1.
RefSeqXP_002015628.1. XM_002015592.1.

3D structure databases

ProteinModelPortalB4GCY0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0176789; FBpp0175281; FBgn0148784.
GeneID6591299.
KEGGdpe:Dper_GL11174.

Organism-specific databases

FlyBaseFBgn0148784. Dper\GL11174.

Phylogenomic databases

KOK10747.
OrthoDBEOG7RFTGN.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4GCY0_DROPE
AccessionPrimary (citable) accession number: B4GCY0
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)