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B4FI87 (B4FI87_MAIZE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL ACF81830.1
Gene names
ORF Names:ZEAMMB73_312744 EMBL AFW62932.1
OrganismZea mays (Maize) EMBL ACF81830.1
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS001214

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 post-SET domain. RuleBase RU004541

Contains SET domain. SAAS SAAS001214

Contains post-SET domain. SAAS SAAS001214

Ontologies

Keywords
   Cellular componentNucleus SAAS SAAS001214
   LigandS-adenosyl-L-methionine SAAS SAAS001214
   Molecular functionMethyltransferase SAAS SAAS001214 RuleBase RU004541
Transferase
Gene Ontology (GO)
   Cellular_componentchromatin

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

nucleus

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionmethyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4FI87 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 71BCC9B55565D78B

FASTA41845,782
        10         20         30         40         50         60 
MPDLSTSYLP PFPELSLDAG ALAVDHAGNA AAAASADAAS AYASSSASVG SGVDDLVIPA 

        70         80         90        100        110        120 
ECRWKGHVRT FDMAGAGAVT TCPAARRGGG KKLSLIPSLE PARTQASASA PTLEERVSEW 

       130        140        150        160        170        180 
AAKKAAAGVP THHCVLPFLT GAPMAVECRL CSKIIYVGEE IKCSVKKCPQ MFHLKCVAED 

       190        200        210        220        230        240 
TSNFTVESFR CPQHTKRCGW GAVALEPLER GDFVIEYVGE VIDDATCEQR LWDIRRRGDK 

       250        260        270        280        290        300 
NFYMCEISKD FTIDATFKGN VSRFLNHSCE PNCKLEKWQV DGETRVGVFA SRSIEVGEPL 

       310        320        330        340        350        360 
TYDYRFVHFG EKVKCHCEAV NCQGYLGSQI KNPIQSILAT VAPQVQLREY SPMHHEAPRL 

       370        380        390        400        410 
KPINHLLPWT NCIEVSFNLR SKRKIDRLCW ARKKKRTSLV PSSTSMPASP SEVPAADF 

« Hide

References

[1]"Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs."
Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J., Walbot V., Yu Y.
PLoS Genet. 5:E1000740-E1000740(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B73 EMBL ACF81830.1.
[2]"The B73 maize genome: complexity, diversity, and dynamics."
Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D., Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K., Fronick C. expand/collapse author list , Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T., Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L., Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P., Vaughn M.W., Ying K., Yeh C.T., Emrich S.J., Jia Y., Kalyanaraman A., Hsia A.P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C., Chaparro C., Chia J.M., Deragon J.M., Estill J.C., Fu Y., Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.
Science 326:1112-1115(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Maize Genome Sequencing Project
Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT036825 mRNA. Translation: ACF81830.1.
CM000780 Genomic DNA. Translation: AFW62932.1.
RefSeqNP_001132822.1. NM_001139350.1.
UniGeneZm.85759.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100194312.
KEGGzma:100194312.

Organism-specific databases

GrameneB4FI87.

Phylogenomic databases

KOK11423.

Family and domain databases

InterProIPR025787. Hist-Lys_N-MeTrfase_SET2_plant.
IPR003616. Post-SET_dom.
IPR001214. SET_dom.
IPR001965. Znf_PHD.
[Graphical view]
PfamPF00856. SET. 1 hit.
[Graphical view]
SMARTSM00249. PHD. 1 hit.
SM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
PROSITEPS50868. POST_SET. 1 hit.
PS51578. SAM_MT43_SET2_2. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4FI87_MAIZE
AccessionPrimary (citable) accession number: B4FI87
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: March 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)