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B4F7R9

- B4F7R9_ARATH

UniProt

B4F7R9 - B4F7R9_ARATH

Protein
Submitted name:

At1g24260

Gene

At1g24260

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. protein binding Source: IntAct
    3. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    At1g24260Imported
    Gene namesi
    Ordered Locus Names:At1g24260Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

    Organism-specific databases

    TAIRiAT1G24260.

    Subcellular locationi

    Nucleus UniRule annotation

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    NucleusUniRule annotationSAAS annotation

    PTM / Processingi

    Proteomic databases

    PRIDEiB4F7R9.

    Expressioni

    Gene expression databases

    GenevestigatoriB4F7R9.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    AGP178393EBI-2315153,EBI-592365

    Protein-protein interaction databases

    IntActiB4F7R9. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliB4F7R9.
    SMRiB4F7R9. Positions 2-70.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 MADS-box domain.UniRule annotation
    Contains K-box domain.SAAS annotation
    Contains MADS-box domain.SAAS annotation

    Phylogenomic databases

    OMAiPLECEPI.
    PhylomeDBiB4F7R9.

    Family and domain databases

    InterProiIPR002487. TF_Kbox.
    IPR002100. TF_MADSbox.
    [Graphical view]
    PfamiPF01486. K-box. 1 hit.
    PF00319. SRF-TF. 1 hit.
    [Graphical view]
    PRINTSiPR00404. MADSDOMAIN.
    SMARTiSM00432. MADS. 1 hit.
    [Graphical view]
    SUPFAMiSSF55455. SSF55455. 1 hit.
    PROSITEiPS51297. K_BOX. 1 hit.
    PS00350. MADS_BOX_1. 1 hit.
    PS50066. MADS_BOX_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4F7R9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN    50
    RGKLYEFCSS SSMLRTLERY QKCNYGAPEP NVPSREALAV ELSSQQEYLK 100
    LKERYDALQR TQRNLLGEDL GPLSTKELES LERQLDSSLK QIRALRTQFM 150
    LDQLNDLQSK ERMLTETNKT LRLRLADGYQ MPLQLNPNQE EVDHYGRHHH 200
    QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM LGWLPYDTNS 250
    I 251
    Length:251
    Mass (Da):29,066
    Last modified:September 23, 2008 - v1
    Checksum:i0057CABD3F1AFC40
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT033157 mRNA. Translation: ACF75546.1.
    RefSeqiNP_564214.2. NM_102272.3.
    UniGeneiAt.24086.

    Genome annotation databases

    GeneIDi839040.
    KEGGiath:AT1G24260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT033157 mRNA. Translation: ACF75546.1 .
    RefSeqi NP_564214.2. NM_102272.3.
    UniGenei At.24086.

    3D structure databases

    ProteinModelPortali B4F7R9.
    SMRi B4F7R9. Positions 2-70.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi B4F7R9. 1 interaction.

    Proteomic databases

    PRIDEi B4F7R9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 839040.
    KEGGi ath:AT1G24260.

    Organism-specific databases

    TAIRi AT1G24260.

    Phylogenomic databases

    OMAi PLECEPI.
    PhylomeDBi B4F7R9.

    Gene expression databases

    Genevestigatori B4F7R9.

    Family and domain databases

    InterProi IPR002487. TF_Kbox.
    IPR002100. TF_MADSbox.
    [Graphical view ]
    Pfami PF01486. K-box. 1 hit.
    PF00319. SRF-TF. 1 hit.
    [Graphical view ]
    PRINTSi PR00404. MADSDOMAIN.
    SMARTi SM00432. MADS. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55455. SSF55455. 1 hit.
    PROSITEi PS51297. K_BOX. 1 hit.
    PS00350. MADS_BOX_1. 1 hit.
    PS50066. MADS_BOX_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Arabidopsis ORF clones."
      de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.
      Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiB4F7R9_ARATH
    AccessioniPrimary (citable) accession number: B4F7R9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)