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B4F7R9

- B4F7R9_ARATH

UniProt

B4F7R9 - B4F7R9_ARATH

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Protein
Submitted name:

At1g24260

Gene

At1g24260

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
At1g24260Imported
Gene namesi
Ordered Locus Names:At1g24260Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Organism-specific databases

TAIRiAT1G24260.

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiB4F7R9.

Expressioni

Gene expression databases

ExpressionAtlasiB4F7R9. baseline and differential.
GenevestigatoriB4F7R9.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
AGP178393EBI-2315153,EBI-592365

Protein-protein interaction databases

IntActiB4F7R9. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliB4F7R9.
SMRiB4F7R9. Positions 2-70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 MADS-box domain.UniRule annotation
Contains K-box domain.SAAS annotation
Contains MADS-box domain.SAAS annotation

Phylogenomic databases

OMAiPLECEPI.
PhylomeDBiB4F7R9.

Family and domain databases

InterProiIPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4F7R9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN
60 70 80 90 100
RGKLYEFCSS SSMLRTLERY QKCNYGAPEP NVPSREALAV ELSSQQEYLK
110 120 130 140 150
LKERYDALQR TQRNLLGEDL GPLSTKELES LERQLDSSLK QIRALRTQFM
160 170 180 190 200
LDQLNDLQSK ERMLTETNKT LRLRLADGYQ MPLQLNPNQE EVDHYGRHHH
210 220 230 240 250
QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM LGWLPYDTNS

I
Length:251
Mass (Da):29,066
Last modified:September 23, 2008 - v1
Checksum:i0057CABD3F1AFC40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT033157 mRNA. Translation: ACF75546.1.
RefSeqiNP_564214.2. NM_102272.3.
UniGeneiAt.24086.

Genome annotation databases

GeneIDi839040.
KEGGiath:AT1G24260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT033157 mRNA. Translation: ACF75546.1 .
RefSeqi NP_564214.2. NM_102272.3.
UniGenei At.24086.

3D structure databases

ProteinModelPortali B4F7R9.
SMRi B4F7R9. Positions 2-70.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi B4F7R9. 1 interaction.

Proteomic databases

PRIDEi B4F7R9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 839040.
KEGGi ath:AT1G24260.

Organism-specific databases

TAIRi AT1G24260.

Phylogenomic databases

OMAi PLECEPI.
PhylomeDBi B4F7R9.

Gene expression databases

ExpressionAtlasi B4F7R9. baseline and differential.
Genevestigatori B4F7R9.

Family and domain databases

InterProi IPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view ]
Pfami PF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view ]
PRINTSi PR00404. MADSDOMAIN.
SMARTi SM00432. MADS. 1 hit.
[Graphical view ]
SUPFAMi SSF55455. SSF55455. 1 hit.
PROSITEi PS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Arabidopsis ORF clones."
    de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB4F7R9_ARATH
AccessioniPrimary (citable) accession number: B4F7R9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)