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B4F7R9 (B4F7R9_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:At1g24260 TAIR AT1G24260
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL ACF75546.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length251 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000476.

Sequence similarities

Contains 1 MADS-box domain. RuleBase RU000476

Contains K-box domain. SAAS SAAS002487

Contains MADS-box domain. SAAS SAAS002487

Binary interactions

With

Entry

#Exp.

IntAct

Notes

AGP178393EBI-2315153,EBI-592365

Sequences

Sequence LengthMass (Da)Tools
B4F7R9 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 0057CABD3F1AFC40

FASTA25129,066
        10         20         30         40         50         60 
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 

        70         80         90        100        110        120 
SSMLRTLERY QKCNYGAPEP NVPSREALAV ELSSQQEYLK LKERYDALQR TQRNLLGEDL 

       130        140        150        160        170        180 
GPLSTKELES LERQLDSSLK QIRALRTQFM LDQLNDLQSK ERMLTETNKT LRLRLADGYQ 

       190        200        210        220        230        240 
MPLQLNPNQE EVDHYGRHHH QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM 

       250 
LGWLPYDTNS I 

« Hide

References

[1]"Arabidopsis ORF clones."
de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT033157 mRNA. Translation: ACF75546.1.
RefSeqNP_564214.2. NM_102272.3.
UniGeneAt.24086.

3D structure databases

ProteinModelPortalB4F7R9.
SMRB4F7R9. Positions 2-70.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActB4F7R9. 1 interaction.

Proteomic databases

PRIDEB4F7R9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID839040.
KEGGath:AT1G24260.

Organism-specific databases

TAIRAT1G24260.

Phylogenomic databases

OMAPLECEPI.
PhylomeDBB4F7R9.

Gene expression databases

GenevestigatorB4F7R9.

Family and domain databases

InterProIPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view]
PfamPF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSPR00404. MADSDOMAIN.
SMARTSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMSSF55455. SSF55455. 1 hit.
PROSITEPS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4F7R9_ARATH
AccessionPrimary (citable) accession number: B4F7R9
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)