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Protein
Submitted name:

Putative ligase

Gene

pBCA095

Organism
Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBCEN216591:GJI4-7394-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ligaseImported
Gene namesi
ORF Names:pBCA095Imported
Encoded oniPlasmid pBCJ2315Imported
OrganismiBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))Imported
Taxonomic identifieri216591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001035: Plasmid pBCJ2315

Interactioni

Protein-protein interaction databases

STRINGi216591.pBCA095.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.
OrthoDBiEOG6BW4VZ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4EQN0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGRWTSERGI RARTPVARNG RMPEFIEPSL AVLAAEPPTS GEWGYEIKFD
60 70 80 90 100
GYRMLARIDA GDVRIFTRNG HDWTARLPHL RSVLERLPVN RAWIDAEAVW
110 120 130 140 150
FDTEGRPNFN GLQNAFDRRR TAGISLVVFD LMWLNNNDLR PWTWRERRAT
160 170 180 190 200
LTKLVAEILG DEVRFSEAID ADPDAMLASA CALGLEGIMG KRVDAPYRSG
210 220 230 240 250
RSDRWIKLKC SKRQEFVIGR FSRRKGATGG VRAVLLGVYE EGGQLRYVGH
260 270 280 290 300
VAPRFAPRQA REFEDRLPSL GRKRSPFVRA PEPEADREFH WLKPELVAEV
310 320 330 340
AFLEWTPTGQ LRHPSFRGLR DDKPARTVTR EDPLELKRAR NSK
Length:343
Mass (Da):39,314
Last modified:September 23, 2008 - v1
Checksum:i185B3F4B613BA039
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747723 Genomic DNA. Translation: CAR57806.1.
RefSeqiYP_002235530.1. NC_011003.1.

Genome annotation databases

EnsemblBacteriaiCAR57806; CAR57806; pBCA095.
GeneIDi6926484.
KEGGibcj:pBCA095.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747723 Genomic DNA. Translation: CAR57806.1.
RefSeqiYP_002235530.1. NC_011003.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216591.pBCA095.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR57806; CAR57806; pBCA095.
GeneIDi6926484.
KEGGibcj:pBCA095.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.
OrthoDBiEOG6BW4VZ.

Enzyme and pathway databases

BioCyciBCEN216591:GJI4-7394-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: J2315Imported.

Entry informationi

Entry nameiB4EQN0_BURCJ
AccessioniPrimary (citable) accession number: B4EQN0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 7, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.