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B4EQN0

- B4EQN0_BURCJ

UniProt

B4EQN0 - B4EQN0_BURCJ

Protein
Submitted name:

Putative ligase

Gene

pBCA095

Organism
Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBCEN216591:GJI4-7394-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ligaseImported
    Gene namesi
    ORF Names:pBCA095Imported
    Encoded oniPlasmid pBCJ2315Imported
    OrganismiBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))Imported
    Taxonomic identifieri216591 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000001035: Plasmid pBCJ2315

    Interactioni

    Protein-protein interaction databases

    STRINGi216591.pBCA095.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.
    OrthoDBiEOG6BW4VZ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4EQN0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGRWTSERGI RARTPVARNG RMPEFIEPSL AVLAAEPPTS GEWGYEIKFD    50
    GYRMLARIDA GDVRIFTRNG HDWTARLPHL RSVLERLPVN RAWIDAEAVW 100
    FDTEGRPNFN GLQNAFDRRR TAGISLVVFD LMWLNNNDLR PWTWRERRAT 150
    LTKLVAEILG DEVRFSEAID ADPDAMLASA CALGLEGIMG KRVDAPYRSG 200
    RSDRWIKLKC SKRQEFVIGR FSRRKGATGG VRAVLLGVYE EGGQLRYVGH 250
    VAPRFAPRQA REFEDRLPSL GRKRSPFVRA PEPEADREFH WLKPELVAEV 300
    AFLEWTPTGQ LRHPSFRGLR DDKPARTVTR EDPLELKRAR NSK 343
    Length:343
    Mass (Da):39,314
    Last modified:September 23, 2008 - v1
    Checksum:i185B3F4B613BA039
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM747723 Genomic DNA. Translation: CAR57806.1.
    RefSeqiYP_002235530.1. NC_011003.1.

    Genome annotation databases

    EnsemblBacteriaiCAR57806; CAR57806; pBCA095.
    GeneIDi6926484.
    KEGGibcj:pBCA095.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM747723 Genomic DNA. Translation: CAR57806.1 .
    RefSeqi YP_002235530.1. NC_011003.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 216591.pBCA095.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAR57806 ; CAR57806 ; pBCA095 .
    GeneIDi 6926484.
    KEGGi bcj:pBCA095.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.
    OrthoDBi EOG6BW4VZ.

    Enzyme and pathway databases

    BioCyci BCEN216591:GJI4-7394-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: J2315Imported.

    Entry informationi

    Entry nameiB4EQN0_BURCJ
    AccessioniPrimary (citable) accession number: B4EQN0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3