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Protein
Submitted name:

Type III secretion system protein

Gene

bcscC

Organism
Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciBCEN216591:GJI4-5684-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion system proteinImported
Gene namesi
Name:bcscCImported
ORF Names:BCAM2055Imported
OrganismiBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))Imported
Taxonomic identifieri216591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000001035 Componenti: Chromosome 2

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4242Sequence analysisAdd
BLAST
Chaini43 – 681639Sequence analysisPRO_5002804460Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi216591.BCAM2055.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini196 – 338143Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000214462.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4EN98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRRVASIRF QPRSLQRAAL AVCATALLTA SLCMAPAQHA RAADLRWRNK
60 70 80 90 100
PFTIVANGKK IGDFIRELAS SQGVTAVVDP KVDGVISGRF SGTPQQTLDT
110 120 130 140 150
ICSTYGLTWY YDGSFLYVDP ADQSQTQMIP IPPNASGEIG RALQAMQIPD
160 170 180 190 200
KRYTLVINDR ANSVYVAGPR RYVELVRQAV GSVGDPSANG AHADIRAFRL
210 220 230 240 250
KYGWASDFTI NRSGKEVTVP GVATILRRLF GKGGGTTAAP SSTPLGQAAR
260 270 280 290 300
QVKLGSGLTI AVPRLDFPDI SGGPRQGGYG GADGSMGGGF SPFSNNGGGD
310 320 330 340 350
TLPQIVADPA INAVIVRDLP ENMYRYQSLI GQLDERPRIV EINVTIIDIN
360 370 380 390 400
EDSLDSLGID WRLHTTHGDV QIGNGQNALN GNTQYNGAGN PPLTFGIGTS
410 420 430 440 450
ETGQTGAFMP TGIALTASIG GSLRNYLLTR VNALAQKGQA QLRSKPKVLA
460 470 480 490 500
LDNTEAILEN LTQFYVQVPG YQDSSLYSVT TGTSIKVTPM IVDEAIRNAA
510 520 530 540 550
AVSGNPQSVM MSIDIQDGNI VPGQAVSNVP VIQQRNIVTK TMIDEGKSLL
560 570 580 590 600
IAGFNDDEVR LNKSGVPWLS DIPLIGNLFK YTDKSGNHME RFYLLTPRVV
610 620 630 640 650
TSASMYAPDG SPVNPGVDGP ANQEGMSMYR PPDNDVTVPL TPKPLPGTKF
660 670 680
GPPALPPPKD TAASQPAATT AGVVTHVDEH H
Length:681
Mass (Da):72,502
Last modified:September 23, 2008 - v1
Checksum:i9C512C0F8A05AE0B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747721 Genomic DNA. Translation: CAR55914.1.
RefSeqiWP_006487858.1. NC_011001.1.

Genome annotation databases

EnsemblBacteriaiCAR55914; CAR55914; BCAM2055.
GeneIDi6930383.
KEGGibcj:BCAM2055.
PATRICi19083411. VBIBurCen118154_5822.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747721 Genomic DNA. Translation: CAR55914.1.
RefSeqiWP_006487858.1. NC_011001.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216591.BCAM2055.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR55914; CAR55914; BCAM2055.
GeneIDi6930383.
KEGGibcj:BCAM2055.
PATRICi19083411. VBIBurCen118154_5822.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000214462.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Enzyme and pathway databases

BioCyciBCEN216591:GJI4-5684-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4EN98_BURCJ
AccessioniPrimary (citable) accession number: B4EN98
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 7, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.