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Protein
Submitted name:

Lectin

Gene

BCAM0186

Organism
Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi29Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi110Calcium 2Combined sources1
Metal bindingi114Calcium 2Combined sources1
Metal bindingi116Calcium 1Combined sources1
Metal bindingi116Calcium 2Combined sources1
Metal bindingi118Calcium 1Combined sources1
Metal bindingi119Calcium 1Combined sources1
Metal bindingi119Calcium 2Combined sources1
Metal bindingi129Calcium 1; via carbonyl oxygenCombined sources1
Binding sitei129Mannose; via amide nitrogen and carbonyl oxygenCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
LectinImported
Gene namesi
ORF Names:BCAM0186Imported
OrganismiBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))Imported
Taxonomic identifieri216591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000001035 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi216591.BCAM0186.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2VNVX-ray1.70A/B/C/D/E1-129[»]
2WR9X-ray1.75A/B/C/D2-129[»]
2WRAX-ray1.10A2-129[»]
ProteinModelPortaliB4EH87.
SMRiB4EH87.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiB4EH87.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 128PA-IILInterPro annotationAdd BLAST115

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni29 – 32Mannose bindingCombined sources4
Regioni111 – 119Mannose bindingCombined sources9

Phylogenomic databases

HOGENOMiHOG000110720.
KOiK20277.
OMAiNDYNDGI.
OrthoDBiPOG091H0OFR.

Family and domain databases

Gene3Di2.60.120.400. 1 hit.
InterProiIPR010907. Ca-mediated_lectin.
[Graphical view]
PfamiPF07472. PA-IIL. 1 hit.
[Graphical view]
SUPFAMiSSF82026. SSF82026. 1 hit.

Sequencei

Sequence statusi: Complete.

B4EH87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADSQTSSNR AGEFSIPPNT DFRAIFFANA AEQQHIKLFI GDSQEPAAYH
60 70 80 90 100
KLTTRDGPRE ATLNSGNGKI RFEVSVNGKP SATDARLAPI NGKKSDGSPF
110 120
TVNFGIVVSE DGHDSDYNDG IVVLQWPIG
Length:129
Mass (Da):13,895
Last modified:September 23, 2008 - v1
Checksum:i5972499DAE2BC192
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747721 Genomic DNA. Translation: CAR54044.1.
RefSeqiWP_006479996.1. NC_011001.1.

Genome annotation databases

EnsemblBacteriaiCAR54044; CAR54044; BCAM0186.
KEGGibcj:BCAM0186.
PATRICi19079499. VBIBurCen118154_3869.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747721 Genomic DNA. Translation: CAR54044.1.
RefSeqiWP_006479996.1. NC_011001.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2VNVX-ray1.70A/B/C/D/E1-129[»]
2WR9X-ray1.75A/B/C/D2-129[»]
2WRAX-ray1.10A2-129[»]
ProteinModelPortaliB4EH87.
SMRiB4EH87.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216591.BCAM0186.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR54044; CAR54044; BCAM0186.
KEGGibcj:BCAM0186.
PATRICi19079499. VBIBurCen118154_3869.

Phylogenomic databases

HOGENOMiHOG000110720.
KOiK20277.
OMAiNDYNDGI.
OrthoDBiPOG091H0OFR.

Miscellaneous databases

EvolutionaryTraceiB4EH87.

Family and domain databases

Gene3Di2.60.120.400. 1 hit.
InterProiIPR010907. Ca-mediated_lectin.
[Graphical view]
PfamiPF07472. PA-IIL. 1 hit.
[Graphical view]
SUPFAMiSSF82026. SSF82026. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB4EH87_BURCJ
AccessioniPrimary (citable) accession number: B4EH87
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: November 2, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.