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B4EGV9 (B4EGV9_BURCJ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase 2 HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:dadX EMBL CAR55060.1
Synonyms:alr2 HAMAP MF_01201
Ordered Locus Names:BceJ2315_46570
ORF Names:BCAM1204 EMBL CAR55060.1
OrganismBurkholderia cepacia (strain J2315 / LMG 16656) (Burkholderia cenocepacia (strain J2315)) [Complete proteome] [HAMAP] EMBL CAR55060.1
Taxonomic identifier216591 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length373 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2521Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B4EGV9 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: C6C05775D57E545A

FASTA37340,288
        10         20         30         40         50         60 
MPRPIVAHIR PDAVRHNLDF IRRTVAPSRV WAVVKANAYG HGIERIYPGL AAADGIALLD 

        70         80         90        100        110        120 
LDEAVRVREL GWDKPVLLLE GVFEPADVEL ADRYRLTVAV HCDEQLDLLI AAKPRQPIDI 

       130        140        150        160        170        180 
QLKMNSGMNR LGYRPAAFRA AWERAASAPS IGKITLMMHF ANADEGEVDW QLEQFDATTA 

       190        200        210        220        230        240 
GIPGERSVSN SAAVLWHPRA HRDWVRPGTI LYGASPTGAA RHIADTPLVA AMTLTSKIIG 

       250        260        270        280        290        300 
VQTLAPEETV GYGRRFTADR PMRIGVVACG YADGYPRHAP TGTPIAVDGV MTRVVGRVSM 

       310        320        330        340        350        360 
DMLTVDLTPC PNAGIGSSVE LWGDQVKVDD VAEASGTIGY ELMCALARRV PVVIVPPGAS 

       370 
TVQAPLRTGS YGR

« Hide

References

[1]"Genomic analysis of Burkholderia cenocepacia J2315, an epidemic cystic fibrosis pathogen."
Holden M.T.G.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM747721 Genomic DNA. Translation: CAR55060.1.
RefSeqYP_002233820.1. NC_011001.1.

3D structure databases

ProteinModelPortalB4EGV9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB4EGV9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6928892.
GenomeReviewsGene locus BceJ2315_46570 in contig AM747721_GR.
KEGGbcj:BCAM1204.
PATRIC19081633. VBIBurCen118154_4932.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMASVELWGD.
ProtClustDBPRK13340.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4EGV9_BURCJ
AccessionPrimary (citable) accession number: B4EGV9
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info