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B4ECQ0 (B4ECQ0_BURCJ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase 1 HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:dadX EMBL CAR52410.1
Synonyms:alr1 HAMAP MF_01201
Ordered Locus Names:BceJ2315_20720
ORF Names:BCAL2110 EMBL CAR52410.1
OrganismBurkholderia cepacia (strain J2315 / LMG 16656) (Burkholderia cenocepacia (strain J2315)) [Complete proteome] [HAMAP]
Taxonomic identifier216591 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length356 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2531Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B4ECQ0 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 3AF587E4CB6EAD46

FASTA35638,168
        10         20         30         40         50         60 
MPRPISATIH TAALANNLSV VRRFAGPSKV WAVVKANAYG HGLARVFPGL RGTDGFGLLD 

        70         80         90        100        110        120 
LDEAVKLREL GWAGPILLLE GFFRSTDIDV IDRYSLTTTV HNDEQMRMLE TARLSKPVNV 

       130        140        150        160        170        180 
QLKMNSGMNR LGYVPEKYRA AWERARACPG IGQITLMTHF SDADNERGVA EQLATFERGA 

       190        200        210        220        230        240 
ENIAGARSLA NSAAVLWHPD THFDWVRPGI VLYGASPSGL SSDIADTGLK PAMTLASELI 

       250        260        270        280        290        300 
AVQTIAKGQA IGYGSTFSAQ APMRIGVVAC GYADGYPRVA PEGTPVIVDG IRTRIVGRVS 

       310        320        330        340        350 
MDMITVDLTP CPQAGVGARV ELWGNALPID DVARHCGTIG YELMCAVAGR VPVRAE

« Hide

References

[1]"Genomic analysis of Burkholderia cenocepacia J2315, an epidemic cystic fibrosis pathogen."
Holden M.T.G.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM747720 Genomic DNA. Translation: CAR52410.1.
RefSeqYP_002231236.1. NC_011000.1.

3D structure databases

ProteinModelPortalB4ECQ0.
ModBaseSearch...

Protein-protein interaction databases

STRINGB4ECQ0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6934024.
GenomeReviewsGene locus BceJ2315_20720 in contig AM747720_GR.
KEGGbcj:BCAL2110.
PATRIC19076075. VBIBurCen118154_2193.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMANWQIKAL.
ProtClustDBPRK00053.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4ECQ0_BURCJ
AccessionPrimary (citable) accession number: B4ECQ0
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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