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Protein

Protein CyaY

Gene

cyaY

Organism
Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBCEN216591:GJI4-294-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein CyaYUniRule annotation
Gene namesi
Name:cyaYUniRule annotation
Ordered Locus Names:BceJ2315_02750
ORF Names:BCAL0273
OrganismiBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Taxonomic identifieri216591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001035 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 108108Protein CyaYPRO_1000096237Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi216591.BCAL0273.

Structurei

Secondary structure

1
108
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 2623Combined sources
Beta strandi32 – 365Combined sources
Beta strandi39 – 435Combined sources
Beta strandi49 – 557Combined sources
Helixi56 – 583Combined sources
Beta strandi60 – 656Combined sources
Beta strandi68 – 758Combined sources
Beta strandi78 – 814Combined sources
Turni82 – 843Combined sources
Helixi88 – 10013Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JPDX-ray1.90A1-108[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the frataxin family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1965.
HOGENOMiHOG000190728.
KOiK06202.
OMAiNRQEPMH.
OrthoDBiEOG6GXTXM.

Family and domain databases

Gene3Di3.30.920.10. 1 hit.
HAMAPiMF_00142. CyaY.
InterProiIPR002908. Frataxin/CyaY.
IPR020895. Frataxin_CS.
[Graphical view]
PANTHERiPTHR16821. PTHR16821. 1 hit.
PfamiPF01491. Frataxin_Cyay. 1 hit.
[Graphical view]
SUPFAMiSSF55387. SSF55387. 1 hit.
TIGRFAMsiTIGR03421. FeS_CyaY. 1 hit.
PROSITEiPS01344. FRATAXIN_1. 1 hit.
PS50810. FRATAXIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E5Z6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDTEYLARA EAVLAAVERT VDVANDGDHD IDLERNGSVL TLTFENGSKI
60 70 80 90 100
IVNLQPPMKE VWIAAKAGGF HYRFIDGEWR DTRTGTEFFS ALTDYATQQA

GLPITFSA
Length:108
Mass (Da):11,927
Last modified:September 23, 2008 - v1
Checksum:iCB7BFEB93996AB20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747720 Genomic DNA. Translation: CAR50583.1.
RefSeqiWP_006482891.1. NC_011000.1.
YP_002229439.1. NC_011000.1.

Genome annotation databases

EnsemblBacteriaiCAR50583; CAR50583; BCAL0273.
GeneIDi6930845.
KEGGibcj:BCAL0273.
PATRICi19072201. VBIBurCen118154_0285.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747720 Genomic DNA. Translation: CAR50583.1.
RefSeqiWP_006482891.1. NC_011000.1.
YP_002229439.1. NC_011000.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JPDX-ray1.90A1-108[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216591.BCAL0273.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR50583; CAR50583; BCAL0273.
GeneIDi6930845.
KEGGibcj:BCAL0273.
PATRICi19072201. VBIBurCen118154_0285.

Phylogenomic databases

eggNOGiCOG1965.
HOGENOMiHOG000190728.
KOiK06202.
OMAiNRQEPMH.
OrthoDBiEOG6GXTXM.

Enzyme and pathway databases

BioCyciBCEN216591:GJI4-294-MONOMER.

Family and domain databases

Gene3Di3.30.920.10. 1 hit.
HAMAPiMF_00142. CyaY.
InterProiIPR002908. Frataxin/CyaY.
IPR020895. Frataxin_CS.
[Graphical view]
PANTHERiPTHR16821. PTHR16821. 1 hit.
PfamiPF01491. Frataxin_Cyay. 1 hit.
[Graphical view]
SUPFAMiSSF55387. SSF55387. 1 hit.
TIGRFAMsiTIGR03421. FeS_CyaY. 1 hit.
PROSITEiPS01344. FRATAXIN_1. 1 hit.
PS50810. FRATAXIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610.

Entry informationi

Entry nameiCYAY_BURCJ
AccessioniPrimary (citable) accession number: B4E5Z6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: September 23, 2008
Last modified: May 27, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.