B4E5U3 (B4E5U3_BURCJ) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 29.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Shikimate dehydrogenase 1 HAMAP MF_00222 EC=1.1.1.25 HAMAP MF_00222 | ||||||||
| Gene names |
| ||||||||
| Organism | Burkholderia cepacia (strain J2315 / LMG 16656) (Burkholderia cenocepacia (strain J2315)) [Complete proteome] [HAMAP] | ||||||||
| Taxonomic identifier | 216591 [NCBI] | ||||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex |
Protein attributes
| Sequence length | 288 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP MF_00222 SAAS SAAS011342 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP MF_00222 SAAS SAAS011342 |
| Sequence similarities | Belongs to the shikimate dehydrogenase family. HAMAP MF_00222 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis HAMAP MF_00222 SAAS SAAS011342 |
| Ligand | NADP HAMAP MF_00222 SAAS SAAS011342 |
| Molecular function | Oxidoreductase RuleBase RU004037 HAMAP MF_00222 SAAS SAAS011342 EMBL CAR53736.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Molecular function | NADP binding Inferred from electronic annotation. Source: InterPro shikimate 3-dehydrogenase (NADP+) activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 136 – 140 | 5 | NADP By similarity HAMAP MF_00222 | ||||||
Sites | |||||||||
| Active site | 74 | 1 | Proton acceptor By similarity HAMAP MF_00222 | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "Genomic analysis of Burkholderia cenocepacia J2315, an epidemic cystic fibrosis pathogen." Holden M.T.G. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AM747720 Genomic DNA. Translation: CAR53736.1. |
| RefSeq | YP_002232515.1. NC_011000.1. |
3D structure databases | |
| ProteinModelPortal | B4E5U3. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | B4E5U3. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 6933204. |
| GenomeReviews | Gene locus BceJ2315_33510 in contig AM747720_GR. |
| KEGG | bcj:BCAL3413. |
| PATRIC | 19078838. VBIBurCen118154_3542. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG553408. |
| OMA | VVFGNPI. |
| ProtClustDB | PRK00258. |
Family and domain databases | |
| HAMAP | MF_00222. Shikimate_DH_AroE. [Tree] |
| InterPro | IPR016040. NAD(P)-bd_dom. IPR011342. Shikimate_DH. IPR013708. Shikimate_DH-bd_N. IPR022893. Shikimate_quinate_DH. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K00014. |
| Pfam | PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00507. AroE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | B4E5U3_BURCJ | ||||||||
| Accession | Primary (citable) accession number: B4E5U3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with