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Protein
Submitted name:

HCG2043421, isoform CRA_c

Gene

RBPMS

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
HCG2043421, isoform CRA_cImported
Submitted name:
RNA-binding protein with multiple-splicingImported
Submitted name:
cDNA FLJ61582, highly similar to RNA-binding protein with multiple splicingImported
Gene namesi
Name:RBPMSImported
ORF Names:hCG_2043421Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 8

Organism-specific databases

HGNCiHGNC:19097. RBPMS.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiB4E3T4.
PeptideAtlasiB4E3T4.

Expressioni

Gene expression databases

BgeeiENSG00000157110.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000340176.

Structurei

3D structure databases

SMRiB4E3T4. Positions 20-111.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 10178RRM (RNA recognition motif)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1457. Eukaryota.
ENOG410XSBT. LUCA.
GeneTreeiENSGT00500000044861.
HOGENOMiHOG000017369.
HOVERGENiHBG069897.
OrthoDBiEOG091G0K3T.
PhylomeDBiB4E3T4.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR024888. RRM_U1_A/B''.
[Graphical view]
PANTHERiPTHR10501. PTHR10501. 1 hit.
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E3T4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNGGKAEKE NTPSEANLQE EEVRTLFVSG LPLDIKPREL YLLFRPFKGY
60 70 80 90 100
EGSLIKLTSK QPVGFVSFDS RSEAEAAKNA LNGIRFDPEI PQTLRLEFAK
110 120 130 140 150
ANTKMAKNKL VGTPNPSTPL PNTVPQFIAR EPYELTVPAL YPSSPEVWAP
160 170 180 190 200
YPLYPAELAP ALPPPAFTYP ASLHAQVIDT HRPGLHSLHH QSFQTWFPRA
210 220
HHTTNTYPAN RSTLKRLMIP SKSS
Length:224
Mass (Da):24,998
Last modified:September 23, 2008 - v1
Checksum:iA2CDA867F4075499
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011204 Genomic DNA. No translation available.
AC102945 Genomic DNA. No translation available.
AC109329 Genomic DNA. No translation available.
KF510316 Genomic DNA. No translation available.
AK304858 mRNA. Translation: BAG65596.1.
CH471080 Genomic DNA. Translation: EAW63460.1.
UniGeneiHs.334587.

Genome annotation databases

EnsembliENST00000517860; ENSP00000428675; ENSG00000157110.
UCSCiuc011lba.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011204 Genomic DNA. No translation available.
AC102945 Genomic DNA. No translation available.
AC109329 Genomic DNA. No translation available.
KF510316 Genomic DNA. No translation available.
AK304858 mRNA. Translation: BAG65596.1.
CH471080 Genomic DNA. Translation: EAW63460.1.
UniGeneiHs.334587.

3D structure databases

SMRiB4E3T4. Positions 20-111.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000340176.

Proteomic databases

EPDiB4E3T4.
PeptideAtlasiB4E3T4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000517860; ENSP00000428675; ENSG00000157110.
UCSCiuc011lba.3. human.

Organism-specific databases

CTDi11030.
HGNCiHGNC:19097. RBPMS.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1457. Eukaryota.
ENOG410XSBT. LUCA.
GeneTreeiENSGT00500000044861.
HOGENOMiHOG000017369.
HOVERGENiHBG069897.
OrthoDBiEOG091G0K3T.
PhylomeDBiB4E3T4.

Miscellaneous databases

ChiTaRSiRBPMS. human.
GenomeRNAii11030.

Gene expression databases

BgeeiENSG00000157110.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR024888. RRM_U1_A/B''.
[Graphical view]
PANTHERiPTHR10501. PTHR10501. 1 hit.
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4E3T4_HUMAN
AccessioniPrimary (citable) accession number: B4E3T4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.