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Protein
Submitted name:

cDNA FLJ52847, highly similar to Tubulin beta-6 chain

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandGTP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ52847, highly similar to Tubulin beta-6 chainImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

MicrotubuleSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiB4E386.
PeptideAtlasiB4E386.
PRIDEiB4E386.

Interactioni

Protein-protein interaction databases

IntActiB4E386. 1 interactor.

Structurei

3D structure databases

ProteinModelPortaliB4E386.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 98TubulinInterPro annotationAdd BLAST98
Domaini100 – 237Tubulin_CInterPro annotationAdd BLAST138

Sequence similaritiesi

Belongs to the tubulin family.SAAS annotation

Phylogenomic databases

eggNOGiKOG1375. Eukaryota.
COG5023. LUCA.
HOVERGENiHBG000089.

Family and domain databases

Gene3Di3.30.1330.20. 1 hit.
3.40.50.1440. 1 hit.
InterProiView protein in InterPro
IPR002453. Beta_tubulin.
IPR008280. Tub_FtsZ_C.
IPR000217. Tubulin.
IPR018316. Tubulin/FtsZ_2-layer-sand-dom.
IPR003008. Tubulin_FtsZ_GTPase.
PANTHERiPTHR11588. PTHR11588. 1 hit.
PfamiView protein in Pfam
PF00091. Tubulin. 1 hit.
PF03953. Tubulin_C. 1 hit.
PRINTSiPR01163. BETATUBULIN.
PR01161. TUBULIN.
SMARTiView protein in SMART
SM00864. Tubulin. 1 hit.
SM00865. Tubulin_C. 1 hit.
SUPFAMiSSF52490. SSF52490. 1 hit.
SSF55307. SSF55307. 1 hit.

Sequencei

Sequence statusi: Complete.

B4E386-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTLLISKIR EEFPDRIMNT FSVMPSPKVS DTVVEPYNAT LSVHQLVENT
60 70 80 90 100
DETYCIDNEA LYDICFRTLK LTTPTYGDLN HLVSATMSGV TTSLRFPGQL
110 120 130 140 150
NADLRKLAVN MVPFPRLHFF MPGFAPLTSR GSQQYRALTV PELTQQMFDA
160 170 180 190 200
RNMMAACDPR HGRYLTVATV FRGPMSMKEV DEQMLAIQSK NSSYFVEWIP
210 220 230 240 250
NNVKVAVCDI PPRGLKMAST FIGNSTAIQE LFKRISEQFS AMFRRKAFLH
260 270 280 290 300
WFTGEGMDEM EFTEAESNMN DLVSEYQQYQ DATANDGEEA FEDEEEEIDG
Length:300
Mass (Da):34,083
Last modified:September 23, 2008 - v1
Checksum:iCEB1099F2F3862EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304616 mRNA. Translation: BAG65398.1.
RefSeqiNP_001290458.1. NM_001303529.1.
NP_001290459.1. NM_001303530.1.
UniGeneiHs.193491.
Hs.744066.

Genome annotation databases

GeneIDi84617.

Similar proteinsi

Entry informationi

Entry nameiB4E386_HUMAN
AccessioniPrimary (citable) accession number: B4E386
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: August 30, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.