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B4E2Q8 (B4E2Q8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

cDNA FLJ61555, highly similar to Zinc finger protein 561 EMBL BAG65220.1
Gene names
Name:ZNF561 Ensembl ENSP00000346687
OrganismHomo sapiens (Human) [Reference proteome] EMBL BAG65220.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length350 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B4E2Q8 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 9183026F3331593F

FASTA35039,225
        10         20         30         40         50         60 
MRVQNGGNTS EGNCYGKDTL SVHKEASTGQ ELSKFNPCGK VFTLTPGLAV HLEVLNARQP 

        70         80         90        100        110        120 
YKCKECGKGF KYFASLDNHM GIHTDEKLCE FQEYGRAVTA SSHLKQCVAV HTGKKSKKTK 

       130        140        150        160        170        180 
KCGKSFTNFS QLYAPVKTHK GEKSFECKEC GRSFRNSSCL NDHIQIHTGI KPHKCTYCGK 

       190        200        210        220        230        240 
AFTRSTQLTE HVRTHTGIKP YECKECGQAF AQYSGLSIHI RSHSGKKPYQ CKECGKAFTT 

       250        260        270        280        290        300 
STSLIQHTRI HTGEKPYECV ECGKTFITSS RRSKHLKTHS GEKPFVCKIC GKAFLYSSRL 

       310        320        330        340        350 
NVHLRTHTGE KPFVCKECGK AFAVSSRLSR HERIHTGEKP YECKDMSVTI 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and biology of human chromosome 19."
Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. expand/collapse author list , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Trachea EMBL BAG65220.1.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC008759 Genomic DNA. No translation available.
AK304383 mRNA. Translation: BAG65220.1.
UniGeneHs.720081.

3D structure databases

ProteinModelPortalB4E2Q8.
SMRB4E2Q8. Positions 18-345.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000354661; ENSP00000346687; ENSG00000171469.

Organism-specific databases

HGNCHGNC:28684. ZNF561.
GenAtlasSearch...

Phylogenomic databases

HOVERGENHBG018163.

Family and domain databases

Gene3D3.30.160.60. 9 hits.
InterProIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTSM00355. ZnF_C2H2. 8 hits.
[Graphical view]
PROSITEPS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 9 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio35477343.

Entry information

Entry nameB4E2Q8_HUMAN
AccessionPrimary (citable) accession number: B4E2Q8
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.