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B4E2Q8

- B4E2Q8_HUMAN

UniProt

B4E2Q8 - B4E2Q8_HUMAN

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Protein
Submitted name:

Zinc finger protein 561

Gene
ZNF561
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein 561Imported
Submitted name:
cDNA FLJ61555, highly similar to Zinc finger protein 561Imported
Gene namesi
Name:ZNF561Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 19

Organism-specific databases

HGNCiHGNC:28684. ZNF561.

Structurei

3D structure databases

ProteinModelPortaliB4E2Q8.
SMRiB4E2Q8. Positions 18-345.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG018163.

Family and domain databases

Gene3Di3.30.160.60. 9 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 8 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 9 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E2Q8-1 [UniParc]FASTAAdd to Basket

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MRVQNGGNTS EGNCYGKDTL SVHKEASTGQ ELSKFNPCGK VFTLTPGLAV    50
HLEVLNARQP YKCKECGKGF KYFASLDNHM GIHTDEKLCE FQEYGRAVTA 100
SSHLKQCVAV HTGKKSKKTK KCGKSFTNFS QLYAPVKTHK GEKSFECKEC 150
GRSFRNSSCL NDHIQIHTGI KPHKCTYCGK AFTRSTQLTE HVRTHTGIKP 200
YECKECGQAF AQYSGLSIHI RSHSGKKPYQ CKECGKAFTT STSLIQHTRI 250
HTGEKPYECV ECGKTFITSS RRSKHLKTHS GEKPFVCKIC GKAFLYSSRL 300
NVHLRTHTGE KPFVCKECGK AFAVSSRLSR HERIHTGEKP YECKDMSVTI 350
Length:350
Mass (Da):39,225
Last modified:September 23, 2008 - v1
Checksum:i9183026F3331593F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC008759 Genomic DNA. No translation available.
AK304383 mRNA. Translation: BAG65220.1.
UniGeneiHs.720081.

Genome annotation databases

EnsembliENST00000354661; ENSP00000346687; ENSG00000171469.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC008759 Genomic DNA. No translation available.
AK304383 mRNA. Translation: BAG65220.1 .
UniGenei Hs.720081.

3D structure databases

ProteinModelPortali B4E2Q8.
SMRi B4E2Q8. Positions 18-345.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000354661 ; ENSP00000346687 ; ENSG00000171469 .

Organism-specific databases

HGNCi HGNC:28684. ZNF561.
GenAtlasi Search...

Phylogenomic databases

HOVERGENi HBG018163.

Miscellaneous databases

NextBioi 35477343.

Family and domain databases

Gene3Di 3.30.160.60. 9 hits.
InterProi IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF00096. zf-C2H2. 1 hit.
[Graphical view ]
SMARTi SM00355. ZnF_C2H2. 8 hits.
[Graphical view ]
PROSITEi PS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 9 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biology of human chromosome 19."
    Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V.
    , Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.
    Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TracheaImported.
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiB4E2Q8_HUMAN
AccessioniPrimary (citable) accession number: B4E2Q8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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