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Protein
Submitted name:

cDNA FLJ61677, highly similar to CD209 antigen

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ61677, highly similar to CD209 antigenImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA26199.

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PRIDEiB4E2A8.

Expressioni

Gene expression databases

BgeeiB4E2A8.
ExpressionAtlasiB4E2A8. baseline and differential.

Family & Domainsi

Sequence similaritiesi

Contains C-type lectin domain.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000013222.
HOVERGENiHBG050992.
KOiK06563.

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E2A8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNSQRNWHD SITACKEVGA QLVVIKSAEE QNFLQLQSSR SNRFTWMGLS
60 70 80 90 100
DLNQEGTWQW VDGSPLLPSF KQYWNRGEPN NVGEEDCAEF SGNGWNDDKC
110 120 130
NLAKFWICKK SAASCSRDEE QFLSPAPATP NPPPA
Length:135
Mass (Da):15,186
Last modified:September 23, 2008 - v1
Checksum:i5BAFCEDE6E84250A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304190 mRNA. Translation: BAG65070.1.
RefSeqiNP_001138371.1. NM_001144899.1.
UniGeneiHs.278694.

Genome annotation databases

GeneIDi30835.
KEGGihsa:30835.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304190 mRNA. Translation: BAG65070.1.
RefSeqiNP_001138371.1. NM_001144899.1.
UniGeneiHs.278694.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB4E2A8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi30835.
KEGGihsa:30835.

Organism-specific databases

CTDi30835.
PharmGKBiPA26199.

Phylogenomic databases

HOGENOMiHOG000013222.
HOVERGENiHBG050992.
KOiK06563.

Miscellaneous databases

GenomeRNAii30835.
NextBioi52950.

Gene expression databases

BgeeiB4E2A8.
ExpressionAtlasiB4E2A8. baseline and differential.

Family and domain databases

Gene3Di3.10.100.10. 1 hit.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTiSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 1 hit.
PROSITEiPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TracheaImported.

Entry informationi

Entry nameiB4E2A8_HUMAN
AccessioniPrimary (citable) accession number: B4E2A8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: March 4, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.