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Protein
Submitted name:

cDNA FLJ60393, highly similar to JmjC domain-containing histone demethylationprotein 3C (EC 1.14.11.-)

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ60393, highly similar to JmjC domain-containing histone demethylationprotein 3C (EC 1.14.11.-)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA164721503.

PTM / Processingi

Proteomic databases

PeptideAtlasiB4E239.
PRIDEiB4E239.

Expressioni

Gene expression databases

GenevisibleiB4E239. HS.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 129129JmjCInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains JmjC domain.SAAS annotation

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

HOGENOMiHOG000231125.
HOVERGENiHBG080483.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR003347. JmjC_dom.
IPR002999. Tudor.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF02373. JmjC. 1 hit.
[Graphical view]
SMARTiSM00558. JmjC. 1 hit.
SM00249. PHD. 2 hits.
SM00333. TUDOR. 2 hits.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiPS51184. JMJC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E239-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWKTTFAWHT EDMDLYSINY LHFGEPKSWY AIPPEHGKRL ERLAQGFFPS
60 70 80 90 100
SSQGCDAFLR HKMTLISPSV LKKYGIPFDK ITQEAGEFMI TFPYGYHAGF
110 120 130 140 150
NHGFNCAEST NFATVRWIDY GKVAKLCTCR KDMVKISMDI FVRKFQPDRY
160 170 180 190 200
QLWKQGKDIY TIDHTKPTPA STPEVKAWLQ RRRKVRKASR SFQCARSTSK
210 220 230 240 250
RPKADEEEEV SDEVDGAEVP NPDSVTDDLK VSEKSEAAVK LRNTEASSEE
260 270 280 290 300
ESSASRMQVE QNLSDHIKLS GNSCLSTSVT EDIKTEDDKA YSYRSVPSIS
310 320 330 340 350
SEADDSIPLS SGYEKPEKSD PSELSWPKSP ESCSSVAESN ELPEVLSIEE
360 370 380 390 400
EVEETESWAK PLIHLWQTKS PNFAAEQEYN ATVARMKPHC AICTLLMPYH
410 420 430 440 450
KPDSSNEEND ARWETKLDEV VTSEGKTKPL IPEMCFIYSE ENIEYSPPNA
460 470 480 490 500
FLEEDGTSLL ISCAKCCVRV HASCYGIPSH EICDGWLCAR CKRNAWTAEC
510 520 530 540 550
CLCNLRGGAP KQTKNNKWAH VMCAVAVPEV RFTNVPERTQ IDVGRIPLQR
560 570 580 590 600
LKLKCIFCRH RVKRVSGACI QCSYGRCPAS FHVTCAHAAG VLMEPDDWPY
610 620 630 640 650
VVNITCFRHK VNPNVKSKAC EKVISVGQTV ITKHRNTRYY SCRVMAVTSQ
660 670 680 690 700
TFYEVMFDDG SFSRDTFPED IVSRDCLKLG PPAEGEVVQV KWPDGKLYGA
710 720 730 740 750
KYFGSNIAHM YQVEFEDGSQ IAMKREDIYT LDEELPKRVK ARFSTASDMR
760 770 780 790 800
FEDTFYGADI IQGERKRQRV LSSRFKNEYV ADPVYRTFLK SSFQKKCQKR

Q
Length:801
Mass (Da):91,236
Last modified:September 23, 2008 - v1
Checksum:i94F34DA119B1EA91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304095 mRNA. Translation: BAG65001.1.
RefSeqiNP_001291269.1. NM_001304340.1.
UniGeneiHs.709425.

Genome annotation databases

GeneIDi23081.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304095 mRNA. Translation: BAG65001.1.
RefSeqiNP_001291269.1. NM_001304340.1.
UniGeneiHs.709425.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiB4E239.
PRIDEiB4E239.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi23081.

Organism-specific databases

CTDi23081.
PharmGKBiPA164721503.

Phylogenomic databases

HOGENOMiHOG000231125.
HOVERGENiHBG080483.

Miscellaneous databases

GenomeRNAii23081.

Gene expression databases

GenevisibleiB4E239. HS.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR003347. JmjC_dom.
IPR002999. Tudor.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF02373. JmjC. 1 hit.
[Graphical view]
SMARTiSM00558. JmjC. 1 hit.
SM00249. PHD. 2 hits.
SM00333. TUDOR. 2 hits.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiPS51184. JMJC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4E239_HUMAN
AccessioniPrimary (citable) accession number: B4E239
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.