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Protein
Submitted name:

cDNA FLJ54235, highly similar to Ceroid-lipofuscinosis neuronal protein 5

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ54235, highly similar to Ceroid-lipofuscinosis neuronal protein 5Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiB4E1V6.

Expressioni

Gene expression databases

BgeeiB4E1V6.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG005345.

Family and domain databases

InterProiIPR026138. CLN5.
[Graphical view]
PANTHERiPTHR15380. PTHR15380. 1 hit.
PfamiPF15014. CLN5. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E1V6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGDDDIEVF RLQAPVWEFK YGDLLGHLKI MHDAIGFRST LTGKNYTMEW
60 70 80 90 100
YELFQLGNCT FPHLRPEMDA PFWCNQGAAC FFEGIDDVHW KENGTLVQVA
110 120 130 140 150
TISGNMFNQM AKWVKQDNET GIYYETWNVK ASPEKGAETW FDSYDCSKFV
160 170 180 190 200
LRTFNKLAEF GAEFKNIETN YTRIFLYSGE PTYLGNETSV FGPTGNKTLG
210 220 230 240 250
LAIKRFYYPF KPHLPTKEFL LSLLQIFDAV IVHKQFYLFY NFEYWFLPMK
260 270
FPFIKITYEE IPLPIRNKTL SGL
Length:273
Mass (Da):31,983
Last modified:September 23, 2008 - v1
Checksum:i6E2D754FD1D7C168
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304001 mRNA. Translation: BAG64918.1.
UniGeneiHs.30213.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK304001 mRNA. Translation: BAG64918.1.
UniGeneiHs.30213.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB4E1V6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG005345.

Miscellaneous databases

NextBioi35477132.

Gene expression databases

BgeeiB4E1V6.

Family and domain databases

InterProiIPR026138. CLN5.
[Graphical view]
PANTHERiPTHR15380. PTHR15380. 1 hit.
PfamiPF15014. CLN5. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TracheaImported.

Entry informationi

Entry nameiB4E1V6_HUMAN
AccessioniPrimary (citable) accession number: B4E1V6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 27, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.