Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

cDNA FLJ56599, highly similar to Eukaryotic translation initiation factor 2C3

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Initiation factorImported

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ56599, highly similar to Eukaryotic translation initiation factor 2C3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiB4E1P5.
PeptideAtlasiB4E1P5.

Expressioni

Gene expression databases

GenevisibleiB4E1P5. HS.

Interactioni

Protein-protein interaction databases

IntActiB4E1P5. 1 interaction.
STRINGi9606.ENSP00000362287.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini64 – 177114PAZInterPro annotationAdd
BLAST
Domaini346 – 647302PiwiInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the argonaute family.UniRule annotation
Contains 1 PAZ domain.UniRule annotation
Contains 1 Piwi domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG1041. Eukaryota.
ENOG410XP07. LUCA.
HOGENOMiHOG000116043.
HOVERGENiHBG006101.
KOiK11593.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR014811. ArgoL1.
IPR032472. ArgoL2.
IPR032473. Argonaute_Mid_dom.
IPR003100. PAZ_dom.
IPR003165. Piwi.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF08699. ArgoL1. 1 hit.
PF16488. ArgoL2. 1 hit.
PF16487. ArgoMid. 1 hit.
PF02170. PAZ. 1 hit.
PF02171. Piwi. 1 hit.
[Graphical view]
SMARTiSM01163. DUF1785. 1 hit.
SM00949. PAZ. 1 hit.
SM00950. Piwi. 1 hit.
[Graphical view]
SUPFAMiSSF101690. SSF101690. 1 hit.
SSF53098. SSF53098. 1 hit.
PROSITEiPS50821. PAZ. 1 hit.
PS50822. PIWI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4E1P5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYTPVGRSF FSAPEGYDHP LGGGREVWFG FHQSVRPAMW KMMLNIDVSA
60 70 80 90 100
TAFYKAQPVI QFMCEVLDIH NIDEQPRPLT DSHRVKFTKE IKGLKVEVTH
110 120 130 140 150
CGTMRRKYRV CNVTRRPASH QTFPLQLENG QTVERTVAQY FREKYTLQLK
160 170 180 190 200
YPHLPCLQVG QEQKHTYPPL EVCNIVAGQR CIKKLTDNQT STMIKATARS
210 220 230 240 250
APDRQEEISR LVRSANYETD PFVQEFQFKV RDEMAHVTGR VLPAPMLQYG
260 270 280 290 300
GRNRTVATPS HGVWDMRGKQ FHTGVEIKMW AIACFATQRQ CREEILKGFT
310 320 330 340 350
DQLRKISKDA GMPIQGQPCF CKYAQGADSV EPMFRHLKNT YSGLQLIIVI
360 370 380 390 400
LPGKTPVYAE VKRVGDTLLG MATQCVQVKN VIKTSPQTLS NLCLKINVKL
410 420 430 440 450
GGINNILVPH QRPSVFQQPV IFLGADVTHP PAGDGKKPSI AAVVGSMDAH
460 470 480 490 500
PSRYCATVRV QRPRQEIIQD LASMVRELLI QFYKSTRFKP TRIIFYRDGV
510 520 530 540 550
SEGQFRQVLY YELLAIREAC ISLEKDYQPG ITYIVVQKRH HTRLFCADRT
560 570 580 590 600
ERVGRSGNIP AGTTVDTDIT HPYEFDFYLC SHAGIQGTSR PSHYHVLWDD
610 620 630 640 650
NCFTADELQL LTYQLCHTYV RCTRSVSIPA PAYYAHLVAF RARYHLVDKE
660 670 680
HDSAEGSHVS GQSNGRDPQA LAKAVQIHQD TLRTMYFA
Length:688
Mass (Da):78,261
Last modified:September 23, 2008 - v1
Checksum:i4D6ECBC45839FD54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK303929 mRNA. Translation: BAG64857.1.
RefSeqiNP_079128.2. NM_024852.3.
UniGeneiHs.657659.

Genome annotation databases

GeneIDi192669.
KEGGihsa:192669.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK303929 mRNA. Translation: BAG64857.1.
RefSeqiNP_079128.2. NM_024852.3.
UniGeneiHs.657659.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiB4E1P5. 1 interaction.
STRINGi9606.ENSP00000362287.

Proteomic databases

PaxDbiB4E1P5.
PeptideAtlasiB4E1P5.

Protocols and materials databases

DNASUi192669.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi192669.
KEGGihsa:192669.

Organism-specific databases

CTDi192669.

Phylogenomic databases

eggNOGiKOG1041. Eukaryota.
ENOG410XP07. LUCA.
HOGENOMiHOG000116043.
HOVERGENiHBG006101.
KOiK11593.

Miscellaneous databases

GenomeRNAii192669.

Gene expression databases

GenevisibleiB4E1P5. HS.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR014811. ArgoL1.
IPR032472. ArgoL2.
IPR032473. Argonaute_Mid_dom.
IPR003100. PAZ_dom.
IPR003165. Piwi.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF08699. ArgoL1. 1 hit.
PF16488. ArgoL2. 1 hit.
PF16487. ArgoMid. 1 hit.
PF02170. PAZ. 1 hit.
PF02171. Piwi. 1 hit.
[Graphical view]
SMARTiSM01163. DUF1785. 1 hit.
SM00949. PAZ. 1 hit.
SM00950. Piwi. 1 hit.
[Graphical view]
SUPFAMiSSF101690. SSF101690. 1 hit.
SSF53098. SSF53098. 1 hit.
PROSITEiPS50821. PAZ. 1 hit.
PS50822. PIWI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TracheaImported.

Entry informationi

Entry nameiB4E1P5_HUMAN
AccessioniPrimary (citable) accession number: B4E1P5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.