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Protein
Submitted name:

cDNA FLJ56474, highly similar to Histone deacetylase 6

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ56474, highly similar to Histone deacetylase 6Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiB4DZH6.
PRIDEiB4DZH6.

Expressioni

Gene expression databases

BgeeiENSG00000094631.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000334061.

Structurei

3D structure databases

ProteinModelPortaliB4DZH6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1145 – 120662UBP-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1343. Eukaryota.
COG0123. LUCA.
HOGENOMiHOG000004769.
HOVERGENiHBG051894.
PhylomeDBiB4DZH6.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
3.40.800.20. 2 hits.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR013083. Znf_RING/FYVE/PHD.
IPR001607. Znf_UBP.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 2 hits.
PfamiPF00850. Hist_deacetyl. 2 hits.
PF02148. zf-UBP. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
SMARTiSM00290. ZnF_UBP. 1 hit.
[Graphical view]
PROSITEiPS50271. ZF_UBP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DZH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGANRGRGQ ASSTMTSTGQ DSTTTRQRRS RQNPQSPPQD SSVTSKRNIK
60 70 80 90 100
KGAVPRSIPN LAEVKKKGKM KKLGQAMEED LIVGLQGMDL NLEAEALAGT
110 120 130 140 150
GLVLDEQLNE FHCLWDDSFP EGPERLHAIK EQLIQEGLLD RCVSFQARFA
160 170 180 190 200
EKEELMLVHS LEYIDLMETT QYMNEGELRV LADTYDSVYL HPNSYSCACL
210 220 230 240 250
ASGSVLRLVD AVLGAEIRNG MAIIRPPGHH AQHSLMDGYC MFNHVAVAAR
260 270 280 290 300
YAQQKHRIRR VLIVDWDVHH GQGTQFTFDQ DPSVLYFSIH RYEQGRFWPH
310 320 330 340 350
LKASNWSTTG FGQGQGYTIN VPWNQVGMRD ADYIAAFLHV LLPVALEFQP
360 370 380 390 400
QLVLVAAGFD ALQGDPKGEM AATPAGFAQL THLLMGLAGG KLILSLEGGY
410 420 430 440 450
NLRALAEGVS ASLHTLLGDP CPMLESPGAP CRSAQASVSC ALEALEPFWE
460 470 480 490 500
VLVRSTETVE RDNMEEDNVE ESEEEGPWEP PVLPILTWPV LQSRTGLVYD
510 520 530 540 550
QNMMNHCNLW DSHHPEVPQR ILRIMCRLEE LGLAGRCLTL TPRPATEAEL
560 570 580 590 600
LTCHSAEYVG HLRATEKMKT RELHRESSNF DSIYICPSTF ACAQLATGAA
610 620 630 640 650
CRLVEAVLSG EVLNGAAVVR PPGHHAEQDA ACGFCFFNSV AVAARHAQTI
660 670 680 690 700
SGHALRILIV DWDVHHGNGT QHMFEDDPSV LYVSLHRYDH GTFFPMGDEG
710 720 730 740 750
ASSQIGRAAG TGFTVNVAWN GPRMGDADYL AAWHRLVLPI AYEFNPELVL
760 770 780 790 800
VSAGFDAARG DPLGGCQVSP EGYAHLTHLL MGLASGRIIL ILEGGYNLTS
810 820 830 840 850
ISESMAACTR SLLGDPPPLL TLPRPPLSGA LASITETIQV HRRYWRSLRV
860 870 880 890 900
MKVEDREGPS SSKLVTKKAP QPAKPRLAER MTTREKKVLE AGMGKVTSAS
910 920 930 940 950
FGEESTPGQT NSETAVVALT QDQPSEAATG GATLAQTISE AAIGGAMLGQ
960 970 980 990 1000
TTSEEAVGGA TPDQTTSEET VGGAILDQTT SEDAVGGATL GQTTSEEAVG
1010 1020 1030 1040 1050
GATLAQTTSE AAMEGATLDQ TTSEEAPGGT ELIQTPLASS TDHQTPPTSP
1060 1070 1080 1090 1100
VQGTTPQISP STLIGSLRTL ELGSESQGAS ESQAPGEENL LGEAAGGQDM
1110 1120 1130 1140 1150
ADSMLMQGSR GLTDQAIFYA VTPLPWCPHL VAVCPIPAAG LDVTQPCGDC
1160 1170 1180 1190 1200
GTIQENWVCL SCYQVYCGRY INGHMLQHHG NSGHPLVLSY IDLSAWCYYC
1210 1220
QAYVHHQALL DVKNIAHQNK FGEDMPHPH
Length:1,229
Mass (Da):132,781
Last modified:September 23, 2008 - v1
Checksum:iC9565F32C7CF6EC9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK302926 mRNA. Translation: BAG64088.1.
RefSeqiNP_001308154.1. NM_001321225.1.
UniGeneiHs.6764.

Genome annotation databases

GeneIDi10013.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK302926 mRNA. Translation: BAG64088.1.
RefSeqiNP_001308154.1. NM_001321225.1.
UniGeneiHs.6764.

3D structure databases

ProteinModelPortaliB4DZH6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000334061.

Proteomic databases

PaxDbiB4DZH6.
PRIDEiB4DZH6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10013.

Organism-specific databases

CTDi10013.

Phylogenomic databases

eggNOGiKOG1343. Eukaryota.
COG0123. LUCA.
HOGENOMiHOG000004769.
HOVERGENiHBG051894.
PhylomeDBiB4DZH6.

Miscellaneous databases

ChiTaRSiHDAC6. human.
GenomeRNAii10013.

Gene expression databases

BgeeiENSG00000094631.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
3.40.800.20. 2 hits.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR013083. Znf_RING/FYVE/PHD.
IPR001607. Znf_UBP.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 2 hits.
PfamiPF00850. Hist_deacetyl. 2 hits.
PF02148. zf-UBP. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
SMARTiSM00290. ZnF_UBP. 1 hit.
[Graphical view]
PROSITEiPS50271. ZF_UBP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4DZH6_HUMAN
AccessioniPrimary (citable) accession number: B4DZH6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.