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B4DZ28 (B4DZ28_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG63940.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length981 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains helicase ATP-binding domain. SAAS SAAS007502

Contains helicase C-terminal domain. SAAS SAAS007502

Sequences

Sequence LengthMass (Da)Tools
B4DZ28 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: B7D496117C4DA182

FASTA981112,455
        10         20         30         40         50         60 
MSEDPRGPKV PRKAVVEKPA RAAEREARAL LEKNRSYRLL EDSEESSEET VSRAGSSLQK 

        70         80         90        100        110        120 
KRKKRKHLRK KREEEEEEEA SEKGKKKTGG SKQQTEKPES EDEWERTERE RLQDLEERDA 

       130        140        150        160        170        180 
FAERVRQRDK DRTRNVLERS DKKAYEEAQK RLKMAEEDRK AMVPELRKKS RREYLAKRER 

       190        200        210        220        230        240 
EKLEDLEAEL ADEEFLFGDV ELSRHERQEL KYKRQVRDLA REYRAAGEQE KLEATNRYHM 

       250        260        270        280        290        300 
PKETRGQPAR AVDLVEEESG APGEEQRRWE EARLGAASLK FGARDAASQE PKYQLVLEEE 

       310        320        330        340        350        360 
ETIEFVRATQ LQGDEEPSAP PTSTQAQQKE SIQAVRRSLP VFPFREELLA AIANHQVLII 

       370        380        390        400        410        420 
EGETGSGKTT QIPQYLFEEG YTNKGMKIAC TQPRRVAAMS VAARVAREMG VKLGNEVGYS 

       430        440        450        460        470        480 
IRFEDCTSER TVLRYMTDGM LLREFLSEPD LASYSVVMVD EAHERTLHTD ILFGLIKDVA 

       490        500        510        520        530        540 
RFRPELKVLV ASATMDTARF STFFDDAPVF RIPGRRFPVD IFYTKAPEAD YLEACVVSVL 

       550        560        570        580        590        600 
QIHVTQPPGD ILVFLTGQEE IEAACEMLQD RCRRLGSKIR ELLVLPIYAN LPSDMQARIF 

       610        620        630        640        650        660 
QPTPPGARKV VVATNIAETS LTIEGIIYVL DPGFCKQKSY NPRTGMESLT VTPCSKASAN 

       670        680        690        700        710        720 
QRAGRAGRAA AGKCFRLYTA WAYQHELEET TVPEIQRTSL GNVVLLLKSL GIHDLMHFDF 

       730        740        750        760        770        780 
LDPPPYETLL LALEQLYALG ALNHLGELTT SGRKMAELLV DPMLSKMILA SEKYSCSEEI 

       790        800        810        820        830        840 
LTVAAMLSVN NSIFYRPKDK VVHADNARVN FFLPGGDHLV LLNVYTQWAE SGYSSQWCYE 

       850        860        870        880        890        900 
NFVQFRSMRR ARDVREQLEG LLERVEVGLS PCQGDYIRVR KAITAGYFYH TARLTRSGYR 

       910        920        930        940        950        960 
TVKQQQTVFI HPNSSLFEQQ PRWLLYHELV LTTKEFMRQV LEIESSWLLE VTPHYYKAKE 

       970        980 
LEDPHAKKMP KKIGKTREEL G 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Testis EMBL BAG63940.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK302721 mRNA. Translation: BAG63940.1.
RefSeqNP_001157711.1. NM_001164239.1.
UniGeneHs.485060.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB4DZ28.

Protocols and materials databases

DNASU8449.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8449.
KEGGhsa:8449.

Organism-specific databases

CTD8449.
PharmGKBPA27205.

Phylogenomic databases

HOVERGENHBG039428.
KOK12813.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR002464. DNA/RNA_helicase_DEAH_CS.
IPR011709. DUF1605.
IPR007502. Helicase-assoc_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00270. DEAD. 1 hit.
PF04408. HA2. 1 hit.
PF00271. Helicase_C. 1 hit.
PF07717. OB_NTP_bind. 1 hit.
[Graphical view]
SMARTSM00487. DEXDc. 1 hit.
SM00847. HA2. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00690. DEAH_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi8449.
NextBio31614.

Entry information

Entry nameB4DZ28_HUMAN
AccessionPrimary (citable) accession number: B4DZ28
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.