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Protein
Submitted name:

Interleukin enhancer-binding factor 2

Gene

ILF2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Interleukin enhancer-binding factor 2Imported
Submitted name:
cDNA FLJ51660, highly similar to Interleukin enhancer-binding factor 2Imported
Gene namesi
Name:ILF2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:6037. ILF2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiB4DY09.
PaxDbiB4DY09.

Expressioni

Gene expression databases

ExpressionAtlasiB4DY09. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000355011.

Structurei

3D structure databases

ProteinModelPortaliB4DY09.
SMRiB4DY09. Positions 1-323.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 333333DZFInterPro annotationAdd
BLAST
Domaini23 – 1118925A_SYNTH_3InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3793. Eukaryota.
ENOG410XQCJ. LUCA.
GeneTreeiENSGT00550000074528.
HOVERGENiHBG052120.
KOiK13089.

Family and domain databases

InterProiIPR006116. 2-5-oligoadenylate_synth_N.
IPR006561. DZF_dom.
[Graphical view]
PfamiPF07528. DZF. 1 hit.
[Graphical view]
SMARTiSM00572. DZF. 1 hit.
[Graphical view]
PROSITEiPS50152. 25A_SYNTH_3. 1 hit.
PS51703. DZF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DY09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFPRVKPAP DETSFSEALL KRNQDLAPNS AEQASILSLV TKINNVIDNL
60 70 80 90 100
IVAPGTFEVQ IEEVRQVGSY KKGTMTTGHN VADLVVILKI LPTLEAVAAL
110 120 130 140 150
GNKVVESLRA QDPSEVLTML TNETGFEISS SDATVKILIT TVPPNLRKLD
160 170 180 190 200
PELHLDIKVL QSALAAIRHA RWFEENASQS TVKVLIRLLK DLRIRFPGFE
210 220 230 240 250
PLTPWILDLL GHYAVMNNPT RQPLALNVAY RRCLQILAAG LFLPGSVGIT
260 270 280 290 300
DPCESGNFRV HTVMTLEQQD MVCYTAQTLV RILSHGGFRK ILGQEGDASY
310 320 330 340 350
LASEISTWDG VIVTPSEKAY EKPPEKKEGE EEEENTEEPP QGEEEESMET

QE
Length:352
Mass (Da):38,910
Last modified:September 23, 2008 - v1
Checksum:iFF13423680CA025D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592150 Genomic DNA. No translation available.
AL713889 Genomic DNA. No translation available.
AK302214 mRNA. Translation: BAG63571.1.
RefSeqiNP_001254738.1. NM_001267809.1.
UniGeneiHs.75117.

Genome annotation databases

EnsembliENST00000615950; ENSP00000482909; ENSG00000143621.
GeneIDi3608.
KEGGihsa:3608.
UCSCiuc010pdy.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592150 Genomic DNA. No translation available.
AL713889 Genomic DNA. No translation available.
AK302214 mRNA. Translation: BAG63571.1.
RefSeqiNP_001254738.1. NM_001267809.1.
UniGeneiHs.75117.

3D structure databases

ProteinModelPortaliB4DY09.
SMRiB4DY09. Positions 1-323.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000355011.

Proteomic databases

EPDiB4DY09.
PaxDbiB4DY09.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000615950; ENSP00000482909; ENSG00000143621.
GeneIDi3608.
KEGGihsa:3608.
UCSCiuc010pdy.3. human.

Organism-specific databases

CTDi3608.
HGNCiHGNC:6037. ILF2.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3793. Eukaryota.
ENOG410XQCJ. LUCA.
GeneTreeiENSGT00550000074528.
HOVERGENiHBG052120.
KOiK13089.

Miscellaneous databases

GenomeRNAii3608.
NextBioi14105.

Gene expression databases

ExpressionAtlasiB4DY09. baseline and differential.

Family and domain databases

InterProiIPR006116. 2-5-oligoadenylate_synth_N.
IPR006561. DZF_dom.
[Graphical view]
PfamiPF07528. DZF. 1 hit.
[Graphical view]
SMARTiSM00572. DZF. 1 hit.
[Graphical view]
PROSITEiPS50152. 25A_SYNTH_3. 1 hit.
PS51703. DZF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S., McLaren S., Milne S., Mistry S., Moore M.J., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R., Banerjee R., Bryant S.P., Burford D.C., Burrill W.D., Clegg S.M., Dhami P., Dovey O., Faulkner L.M., Gribble S.M., Langford C.F., Pandian R.D., Porter K.M., Prigmore E.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: TestisImported.
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome."
    Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L., Ye M., Zou H.
    J. Proteomics 96:253-262(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  6. Ensembl
    Submitted (SEP-2014) to UniProtKB
    Cited for: IDENTIFICATION.
  7. "N-terminome analysis of the human mitochondrial proteome."
    Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D., Lane L., Bairoch A., Van Dorsselaer A., Carapito C.
    Proteomics 15:2519-2524(2015) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiB4DY09_HUMAN
AccessioniPrimary (citable) accession number: B4DY09
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: March 16, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.