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Protein
Submitted name:

cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ50887, highly similar to PR domain zinc finger protein 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiB4DW27.
PeptideAtlasiB4DW27.
PRIDEiB4DW27.

Expressioni

Gene expression databases

GenevisibleiB4DW27. HS.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 67SETInterPro annotationAdd BLAST67
Domaini441 – 468C2H2-typeInterPro annotationAdd BLAST28
Domaini469 – 496C2H2-typeInterPro annotationAdd BLAST28
Domaini497 – 524C2H2-typeInterPro annotationAdd BLAST28
Domaini525 – 552C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2461. Eukaryota.
ENOG410ZFVU. LUCA.
HOVERGENiHBG053670.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR001214. SET_dom.
IPR036236. Znf_C2H2_sf.
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 5 hits.
SUPFAMiSSF57667. SSF57667. 3 hits.
PROSITEiView protein in PROSITE
PS50280. SET. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 4 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.

Sequencei

Sequence statusi: Fragment.

B4DW27-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKIYSRGEL HHFIDGFNEE KSNWMRYVNP AHSPREQNLA ACQNGMNIYF
60 70 80 90 100
YTIKPIPANQ ELLVWYCRDF AERLHYPYPG ELTMMNLTQT QSSLKQPSTE
110 120 130 140 150
KNELCPKNVP KREYSVKEIL KLDSNPSKGK DLYRSNISPL TSEKDLDDFR
160 170 180 190 200
RRGSPEMPFY PRVVYPIRAP LPEDFLKASL AYGIERPTYI TRSPIPSSTT
210 220 230 240 250
PSPSARSSPD QSLKSSSPHS SPGNTVSPVG PGSQEHRDSY AYLNASYGTE
260 270 280 290 300
GLGSYPGYAP LPHLPPAFIP SYNAHYPKFL LPPYGMNCNG LSAVSSMNGI
310 320 330 340 350
NNFGLFPRLC PVYSNLLGGG SLPHPMLNPT SLPSSLPSDG ARRLLQPEHP
360 370 380 390 400
REVLVPAPHS AFSFTGAAAS MKDKACSPTS GSPTAGTAAT AEHVVQPKAT
410 420 430 440 450
SAAMAAPSSD EAMNLIKNKR NMTGYKTLPY PLKKQNGKIK YECNVCAKTF
460 470 480 490 500
GQLSNLKVHL RVHSGERPFK CQTCNKGFTQ LAHLQKHYLV HTGEKPHECQ
510 520 530 540 550
VCHKRFSSTS NLKTHLRLHS GEKPYQCKVC PAKFTQFVHL KLHKRLHTRE
560 570 580 590 600
RPHKCSQCHK NYIHLCSLKV HLKGNCAAAP APGLPLEDLT RINEEIEKFD
610 620
ISDNADRLED VEDDISVISV VEKEILAVV
Length:629
Mass (Da):70,046
Last modified:September 23, 2008 - v1
Checksum:i17E63BE19CC57AE7
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei629Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK301341 mRNA. Translation: BAG62889.1.
RefSeqiNP_878911.1. NM_182907.2.
UniGeneiHs.436023.

Genome annotation databases

GeneIDi639.

Similar proteinsi

Entry informationi

Entry nameiB4DW27_HUMAN
AccessioniPrimary (citable) accession number: B4DW27
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: November 22, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.