cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Functionⁱ

GO - Molecular functionⁱ

metal ion binding Source: InterPro
nucleic acid binding Source: InterPro

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: cDNA FLJ50887, highly similar to PR domain zinc finger protein 1Imported Automatic assertion inferred from database entriesⁱ EMBL:BAG62889.1
Organismⁱ	Homo sapiens (Human)Imported Automatic assertion inferred from database entriesⁱ EMBL:BAG62889.1
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

PTM / Processingⁱ

Proteomic databases

PaxDbⁱ	B4DW27.
PeptideAtlasⁱ	B4DW27.

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSG00000057657.
Genevisibleⁱ	B4DW27. HS.

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	9606.ENSP00000358092.

STRINGⁱ

9606.ENSP00000358092.

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	Length	Description	Actions
Domainⁱ	1 – 67	67	SETInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS50280	Add BLAST
Domainⁱ	441 – 468	28	C2H2-typeInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS50157	Add BLAST
Domainⁱ	469 – 496	28	C2H2-typeInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS50157	Add BLAST
Domainⁱ	497 – 524	28	C2H2-typeInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS50157	Add BLAST
Domainⁱ	525 – 552	28	C2H2-typeInterPro annotation Automatic assertion inferred from signature matchⁱ PROSITE:PS50157	Add BLAST

Sequence similaritiesⁱ

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

eggNOGⁱ	KOG2461. Eukaryota. ENOG410ZFVU. LUCA.
HOVERGENⁱ	HBG053670.

Family and domain databases

Gene3Dⁱ	3.30.160.60. 5 hits.
InterProⁱ	IPR001214. SET_dom. IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
Pfamⁱ	PF00856. SET. 1 hit. PF13912. zf-C2H2_6. 2 hits. [Graphical view]
SMARTⁱ	SM00355. ZnF_C2H2. 5 hits. [Graphical view]
PROSITEⁱ	PS50280. SET. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 4 hits. PS50157. ZINC_FINGER_C2H2_2. 4 hits. [Graphical view]

Sequenceⁱ

Sequence statusⁱ: Fragment.

B4DW27-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MEKIYSRGEL HHFIDGFNEE KSNWMRYVNP AHSPREQNLA ACQNGMNIYF 
        60         70         80         90        100
YTIKPIPANQ ELLVWYCRDF AERLHYPYPG ELTMMNLTQT QSSLKQPSTE 
       110        120        130        140        150
KNELCPKNVP KREYSVKEIL KLDSNPSKGK DLYRSNISPL TSEKDLDDFR 
       160        170        180        190        200
RRGSPEMPFY PRVVYPIRAP LPEDFLKASL AYGIERPTYI TRSPIPSSTT 
       210        220        230        240        250
PSPSARSSPD QSLKSSSPHS SPGNTVSPVG PGSQEHRDSY AYLNASYGTE 
       260        270        280        290        300
GLGSYPGYAP LPHLPPAFIP SYNAHYPKFL LPPYGMNCNG LSAVSSMNGI 
       310        320        330        340        350
NNFGLFPRLC PVYSNLLGGG SLPHPMLNPT SLPSSLPSDG ARRLLQPEHP 
       360        370        380        390        400
REVLVPAPHS AFSFTGAAAS MKDKACSPTS GSPTAGTAAT AEHVVQPKAT 
       410        420        430        440        450
SAAMAAPSSD EAMNLIKNKR NMTGYKTLPY PLKKQNGKIK YECNVCAKTF 
       460        470        480        490        500
GQLSNLKVHL RVHSGERPFK CQTCNKGFTQ LAHLQKHYLV HTGEKPHECQ 
       510        520        530        540        550
VCHKRFSSTS NLKTHLRLHS GEKPYQCKVC PAKFTQFVHL KLHKRLHTRE 
       560        570        580        590        600
RPHKCSQCHK NYIHLCSLKV HLKGNCAAAP APGLPLEDLT RINEEIEKFD 
       610        620 
ISDNADRLED VEDDISVISV VEKEILAVV

Length:629

Mass (Da):70,046

Last modified:September 23, 2008 - v1

Checksum:ⁱ17E63BE19CC57AE7

GO

Experimental Info

Feature key	Position(s)	Length	Description	Graphical view	Feature identifier	Actions
Non-terminal residueⁱ	629 – 629	1	Imported Automatic assertion inferred from database entriesⁱ EMBL:BAG62889.1

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AK301341 mRNA. Translation: BAG62889.1.
RefSeqⁱ	NP_878911.1. NM_182907.2.
UniGeneⁱ	Hs.436023.

Genome annotation databases

GeneIDⁱ	639.

GeneIDⁱ

639.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AK301341 mRNA. Translation: BAG62889.1.
RefSeqⁱ	NP_878911.1. NM_182907.2.
UniGeneⁱ	Hs.436023.

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	9606.ENSP00000358092.

STRINGⁱ

9606.ENSP00000358092.

Proteomic databases

PaxDbⁱ	B4DW27.
PeptideAtlasⁱ	B4DW27.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

GeneIDⁱ	639.

GeneIDⁱ

639.

Organism-specific databases

CTDⁱ	639.

CTDⁱ

639.

Phylogenomic databases

eggNOGⁱ	KOG2461. Eukaryota. ENOG410ZFVU. LUCA.
HOVERGENⁱ	HBG053670.

Miscellaneous databases

GenomeRNAiⁱ	639.

GenomeRNAiⁱ

639.

Gene expression databases

Bgeeⁱ	ENSG00000057657.
Genevisibleⁱ	B4DW27. HS.

Family and domain databases

Gene3Dⁱ	3.30.160.60. 5 hits.
InterProⁱ	IPR001214. SET_dom. IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
Pfamⁱ	PF00856. SET. 1 hit. PF13912. zf-C2H2_6. 2 hits. [Graphical view]
SMARTⁱ	SM00355. ZnF_C2H2. 5 hits. [Graphical view]
PROSITEⁱ	PS50280. SET. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 4 hits. PS50157. ZINC_FINGER_C2H2_2. 4 hits. [Graphical view]
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ

B4DW27_HUMAN

Accessionⁱ

Primary (citable) accession number: B4DW27

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	September 7, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB - B4DW27 (B4DW27_HUMAN)

UniProt

B4DW27 - B4DW27_HUMAN

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cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Proteomic databases

Expressionⁱ

Gene expression databases

Interactionⁱ

Protein-protein interaction databases

Family & Domainsⁱ

Domains and Repeats

Sequence similaritiesⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Experimental Info

Sequence databases

Genome annotation databases

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

Entry informationⁱ

Similar proteinsⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - B4DW27 (B4DW27_HUMAN)

UniProt

B4DW27 - B4DW27_HUMAN

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cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Select a section on the left to see content.

<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>Describes post-translational modifications (PTMs) and/or processing events.</p><p><a href='../manual/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>Provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.</p><p><a href='../manual/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>Provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.</p><p><a href='../manual/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>Provides information on sequence similarities with other proteins and the domain(s) present in a protein.</p><p><a href='../manual/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

<p>Provides information about the sequence similarity with other proteins.</p><p><a href='../manual/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Experimental Info

Sequence databases

Genome annotation databases

<p>Is used to point to information related to entries and found in data collections other than UniProtKB.</p><p><a href='../manual/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>Provides general information on the entry.</p><p><a href='../manual/entry_information_section' target='_top'>More...</a></p>Entry informationi

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ