cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Functionⁱ

GO - Molecular functionⁱ

nucleic acid binding Source: InterPro
transcription factor activity, sequence-specific DNA binding Source: InterPro

Complete GO annotation...

GO - Biological processⁱ

transcription, DNA-templated Source: InterPro

Complete GO annotation...

Keywordsⁱ

Ligand	Metal-binding, Zinc

Ligand

Metal-binding, Zinc

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: cDNA FLJ50887, highly similar to PR domain zinc finger protein 1Imported
Organismⁱ	Homo sapiens (Human)Imported
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Subcellular locationⁱ

Nucleus
SAAS annotation
Automatic assertion according to rulesⁱ
- SAAS:SAAS00670694

GO - Cellular componentⁱ

nucleus Source: UniProtKB-SubCell

Complete GO annotation...

Keywords - Cellular componentⁱ

NucleusSAAS annotation

PTM / Processingⁱ

Proteomic databases

PaxDbⁱ	B4DW27.
PeptideAtlas More...PeptideAtlasⁱ	B4DW27.
PRIDEⁱ	B4DW27.

Expressionⁱ

Gene expression databases

Genevisibleⁱ	B4DW27. HS.

Genevisibleⁱ

B4DW27. HS.

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Length
Domainⁱ	1 – 67	SETInterPro annotationAdd BLAST	67
Domainⁱ	441 – 468	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	469 – 496	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	497 – 524	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	525 – 552	C2H2-typeInterPro annotationAdd BLAST	28

Keywords - Domainⁱ

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGⁱ	KOG2461. Eukaryota. ENOG410ZFVU. LUCA.
HOVERGENⁱ	HBG053670.

Family and domain databases

Gene3Dⁱ	3.30.40.10. 1 hit.
InterProⁱ	View protein in InterPro IPR027775. C2H2_Znf_fam_sub. IPR001214. SET_dom. IPR013087. Znf_C2H2_type. IPR013083. Znf_RING/FYVE/PHD.
PANTHERⁱ	PTHR10032. PTHR10032. 1 hit.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00856. SET. 1 hit.
SMARTⁱ	View protein in SMART SM00355. ZnF_C2H2. 5 hits.
SUPFAMⁱ	SSF57667. SSF57667. 3 hits.
PROSITEⁱ	View protein in PROSITE PS50280. SET. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 4 hits. PS50157. ZINC_FINGER_C2H2_2. 4 hits.

Sequenceⁱ

Sequence statusⁱ: Fragment.

B4DW27-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MEKIYSRGEL HHFIDGFNEE KSNWMRYVNP AHSPREQNLA ACQNGMNIYF 
        60         70         80         90        100
YTIKPIPANQ ELLVWYCRDF AERLHYPYPG ELTMMNLTQT QSSLKQPSTE 
       110        120        130        140        150
KNELCPKNVP KREYSVKEIL KLDSNPSKGK DLYRSNISPL TSEKDLDDFR 
       160        170        180        190        200
RRGSPEMPFY PRVVYPIRAP LPEDFLKASL AYGIERPTYI TRSPIPSSTT 
       210        220        230        240        250
PSPSARSSPD QSLKSSSPHS SPGNTVSPVG PGSQEHRDSY AYLNASYGTE 
       260        270        280        290        300
GLGSYPGYAP LPHLPPAFIP SYNAHYPKFL LPPYGMNCNG LSAVSSMNGI 
       310        320        330        340        350
NNFGLFPRLC PVYSNLLGGG SLPHPMLNPT SLPSSLPSDG ARRLLQPEHP 
       360        370        380        390        400
REVLVPAPHS AFSFTGAAAS MKDKACSPTS GSPTAGTAAT AEHVVQPKAT 
       410        420        430        440        450
SAAMAAPSSD EAMNLIKNKR NMTGYKTLPY PLKKQNGKIK YECNVCAKTF 
       460        470        480        490        500
GQLSNLKVHL RVHSGERPFK CQTCNKGFTQ LAHLQKHYLV HTGEKPHECQ 
       510        520        530        540        550
VCHKRFSSTS NLKTHLRLHS GEKPYQCKVC PAKFTQFVHL KLHKRLHTRE 
       560        570        580        590        600
RPHKCSQCHK NYIHLCSLKV HLKGNCAAAP APGLPLEDLT RINEEIEKFD 
       610        620 
ISDNADRLED VEDDISVISV VEKEILAVV

Length:629

Mass (Da):70,046

Last modified:September 23, 2008 - v1

Checksum:ⁱ17E63BE19CC57AE7

GO

Experimental Info

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Non-terminal residueⁱ	629	Imported		1

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AK301341 mRNA. Translation: BAG62889.1.
NCBI Reference Sequences More...RefSeqⁱ	NP_878911.1. NM_182907.2.
UniGeneⁱ	Hs.436023.

Genome annotation databases

GeneIDⁱ	639.

GeneIDⁱ

639.

Similar proteinsⁱ

Entry	Cluster members	Organisms	Length	Cluster ID	Cluster name	Size
B4DW27	O75626-3	Homo sapiens (Human)	691	UniRef100_O75626-3	Cluster: Isoform 3 of PR domain zinc finger protein 1	2

Entry	Cluster members	Organisms	Length	Cluster ID	Cluster name	Size
B4DW27	O75626-3 G1PP90 UPI000762B18B UPI00076743AF UPI000703CBA4 UPI0006D735DC UPI0003ABA912 F7GH30 UPI0002745DD3 UPI0005F4EA13 +14	Homo sapiens (Human) Myotis lucifugus (Little brown bat) Marmota marmota marmota (Alpine marmot) Myotis davidii (David's myotis) Myotis brandtii (Brandt's bat) Macaca fascicularis (Crab-eating macaque) (Cynomolgus monkey) Macaca mulatta (Rhesus macaque) Pan paniscus (Pygmy chimpanzee) (Bonobo) Mandrillus leucophaeus (Drill) (Papio leucophaeus) Pan troglodytes (Chimpanzee) And more	691	UniRef90_O75626-3	Cluster: Isoform 3 of PR domain zinc finger protein 1	25

Entry	Cluster members	Organisms	Length	Cluster ID	Cluster name	Size
B4DW27	Q60636 Q60636-3 UPI0003D7504E UPI000A306D27 UPI000A308544 A0A1U8BZQ8 UPI00035A1C93 A0A096MJU6 UPI0008102912 UPI000A315782 +391	Mus musculus (Mouse) Mus pahari (Gairdner's shrew-mouse) (Coelomys pahari) Mesocricetus auratus (Golden hamster) Rattus norvegicus (Rat) Mus caroli (Ryukyu mouse) (Ricefield mouse) Peromyscus maniculatus bairdii (prairie deer mouse) Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus) Microtus ochrogaster (Prairie vole) Meriones unguiculatus (Mongolian jird) (Mongolian gerbil) Neotoma lepida (Desert woodrat) And more	856	UniRef50_Q60636	Cluster: PR domain zinc finger protein 1	402

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AK301341 mRNA. Translation: BAG62889.1.
NCBI Reference Sequences More...RefSeqⁱ	NP_878911.1. NM_182907.2.
UniGeneⁱ	Hs.436023.

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Proteomic databases

PaxDbⁱ	B4DW27.
PeptideAtlas More...PeptideAtlasⁱ	B4DW27.
PRIDEⁱ	B4DW27.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

GeneIDⁱ	639.

GeneIDⁱ

639.

Organism-specific databases

CTDⁱ	639.

CTDⁱ

639.

Phylogenomic databases

eggNOGⁱ	KOG2461. Eukaryota. ENOG410ZFVU. LUCA.
HOVERGENⁱ	HBG053670.

Miscellaneous databases

GenomeRNAiⁱ	639.

GenomeRNAiⁱ

639.

Gene expression databases

Genevisibleⁱ	B4DW27. HS.

Genevisibleⁱ

B4DW27. HS.

Family and domain databases

Gene3Dⁱ	3.30.40.10. 1 hit.
InterProⁱ	View protein in InterPro IPR027775. C2H2_Znf_fam_sub. IPR001214. SET_dom. IPR013087. Znf_C2H2_type. IPR013083. Znf_RING/FYVE/PHD.
PANTHERⁱ	PTHR10032. PTHR10032. 1 hit.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00856. SET. 1 hit.
SMARTⁱ	View protein in SMART SM00355. ZnF_C2H2. 5 hits.
SUPFAMⁱ	SSF57667. SSF57667. 3 hits.
PROSITEⁱ	View protein in PROSITE PS50280. SET. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 4 hits. PS50157. ZINC_FINGER_C2H2_2. 4 hits.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	B4DW27_HUMAN
Accessionⁱ	B4DW27Primary (citable) accession number: B4DW27
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	September 23, 2008
	Last sequence update:	September 23, 2008
	Last modified:	August 30, 2017
	This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

UniProtKB - B4DW27 (B4DW27_HUMAN)

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cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

Keywords - Cellular componentⁱ

PTM / Processingⁱ

Proteomic databases

Expressionⁱ

Gene expression databases

Family & Domainsⁱ

Domains and Repeats

Keywords - Domainⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Experimental Info

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

Entry informationⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - B4DW27 (B4DW27_HUMAN)

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cDNA FLJ50887, highly similar to PR domain zinc finger protein 1

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Experimental Info

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

PTM / Processingⁱ

Expressionⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ