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B4DU60 (B4DU60_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

cDNA FLJ51306, highly similar to Homo sapiens citrate lyase beta like (CLYBL), transcript variant 2, mRNA EMBL BAG62222.1
Gene names
Name:CLYBL Ensembl ENSP00000404768
OrganismHomo sapiens (Human) [Reference proteome] EMBL BAG62222.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionLyase EMBL BAG62222.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcellular aromatic compound metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcitrate lyase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncitrate (pro-3S)-lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4DU60 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 41E27A0FB163EF07

FASTA30232,853
        10         20         30         40         50         60 
MALRLLRRAA RGAAAAALLR LKASLAADIP RLGYSSSSHH KYIPRRAVLY VPGNDEKKIK 

        70         80         90        100        110        120 
KIPSLNVDCA VLDCEDGVAA NKKNEARLRI VKTLEDIDLG PTEKCVRVNS VSSGLAEEDL 

       130        140        150        160        170        180 
ETLLQSRVLP SSLMLPKVES PEEIQWAVCE ETLKVGPQVG LFLDAVVFGG EDFRASIGAT 

       190        200        210        220        230        240 
SSKETLDILY ARQKIVVIAK AFGLQAIDLV YIDFRDGAGL LRQSREGAAM GFTGKQVIHP 

       250        260        270        280        290        300 
NQIAVVQEQF SPSPEKIKWA EELIAAFKEH QQLGKTVSCS ASQAGVQWRD LGSLQPPPPG 


FK 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and analysis of human chromosome 13."
Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. expand/collapse author list , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Prostate EMBL BAG62222.1.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL137139 Genomic DNA. No translation available.
AL139035 Genomic DNA. No translation available.
AL359748 Genomic DNA. No translation available.
AL445184 Genomic DNA. No translation available.
AK300510 mRNA. Translation: BAG62222.1.
UniGeneHs.655642.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000444838; ENSP00000404768; ENSG00000125246.
UCSCuc010tiy.2. human.

Organism-specific databases

HGNCHGNC:18355. CLYBL.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000242281.
HOVERGENHBG059382.

Family and domain databases

Gene3D3.20.20.60. 1 hit.
InterProIPR005000. Aldehyde-lyase_domain.
IPR011206. Citrate_lyase_beta.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF03328. HpcH_HpaI. 2 hits.
[Graphical view]
PIRSFPIRSF015582. Cit_lyase_B. 1 hit.
SUPFAMSSF51621. SSF51621. 1 hit.
ProtoNetSearch...

Other

NextBio35475103.

Entry information

Entry nameB4DU60_HUMAN
AccessionPrimary (citable) accession number: B4DU60
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.