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Protein
Submitted name:

cDNA FLJ51306, highly similar to Homo sapiens citrate lyase beta like (CLYBL), transcript variant 2, mRNA

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi172 – 1721MagnesiumUniRule annotation

GO - Molecular functioni

  1. lyase activity Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ51306, highly similar to Homo sapiens citrate lyase beta like (CLYBL), transcript variant 2, mRNAImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Structurei

3D structure databases

ProteinModelPortaliB4DU60.
SMRiB4DU60. Positions 71-251.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000242281.
HOVERGENiHBG059382.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
InterProiIPR005000. Aldolase/citrate-lyase_domain.
IPR011206. Citrate_lyase_beta/mcl1/mcl2.
IPR029484. GVQW.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF13900. GVQW. 1 hit.
PF03328. HpcH_HpaI. 2 hits.
[Graphical view]
PIRSFiPIRSF015582. Cit_lyase_B. 1 hit.
SUPFAMiSSF51621. SSF51621. 1 hit.

Sequencei

Sequence statusi: Complete.

B4DU60-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALRLLRRAA RGAAAAALLR LKASLAADIP RLGYSSSSHH KYIPRRAVLY
60 70 80 90 100
VPGNDEKKIK KIPSLNVDCA VLDCEDGVAA NKKNEARLRI VKTLEDIDLG
110 120 130 140 150
PTEKCVRVNS VSSGLAEEDL ETLLQSRVLP SSLMLPKVES PEEIQWAVCE
160 170 180 190 200
ETLKVGPQVG LFLDAVVFGG EDFRASIGAT SSKETLDILY ARQKIVVIAK
210 220 230 240 250
AFGLQAIDLV YIDFRDGAGL LRQSREGAAM GFTGKQVIHP NQIAVVQEQF
260 270 280 290 300
SPSPEKIKWA EELIAAFKEH QQLGKTVSCS ASQAGVQWRD LGSLQPPPPG

FK
Length:302
Mass (Da):32,853
Last modified:September 23, 2008 - v1
Checksum:i41E27A0FB163EF07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK300510 mRNA. Translation: BAG62222.1.
UniGeneiHs.655642.

Genome annotation databases

UCSCiuc010tiy.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK300510 mRNA. Translation: BAG62222.1.
UniGeneiHs.655642.

3D structure databases

ProteinModelPortaliB4DU60.
SMRiB4DU60. Positions 71-251.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiuc010tiy.2. human.

Phylogenomic databases

HOGENOMiHOG000242281.
HOVERGENiHBG059382.

Miscellaneous databases

NextBioi35475103.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
InterProiIPR005000. Aldolase/citrate-lyase_domain.
IPR011206. Citrate_lyase_beta/mcl1/mcl2.
IPR029484. GVQW.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF13900. GVQW. 1 hit.
PF03328. HpcH_HpaI. 2 hits.
[Graphical view]
PIRSFiPIRSF015582. Cit_lyase_B. 1 hit.
SUPFAMiSSF51621. SSF51621. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: ProstateImported.

Entry informationi

Entry nameiB4DU60_HUMAN
AccessioniPrimary (citable) accession number: B4DU60
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: February 4, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.