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B4DT61 (B4DT61_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length81 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Cell surface proteoglycan By similarity. RuleBase RU000649

Subcellular location

Membrane; Single-pass type I membrane protein By similarity RuleBase RU000649.

Sequence similarities

Belongs to the syndecan proteoglycan family. RuleBase RU000649

Sequences

Sequence LengthMass (Da)Tools
B4DT61 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 48C25C2E2DD3A5FA

FASTA819,122
        10         20         30         40         50         60 
MDPAEEDTNV YTEKHSDSLF KRTEVLAAVI AGGVIGFLFA IFLILLLVYR MRKKDEGSYD 

        70         80 
LGERKPSSAA YQKAPTKEFY A 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Pericardium EMBL BAG61873.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK300067 mRNA. Translation: BAG61873.1.
UniGeneHs.1501.
Hs.598247.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000263414.
HOVERGENHBG004501.

Gene expression databases

ArrayExpressB4DT61.
BgeeB4DT61.

Family and domain databases

InterProIPR003585. Neurexin-like.
IPR001050. Syndecan.
IPR027789. Syndecan/Neurexin_dom.
[Graphical view]
PANTHERPTHR10915. PTHR10915. 1 hit.
PfamPF01034. Syndecan. 1 hit.
[Graphical view]
SMARTSM00294. 4.1m. 1 hit.
[Graphical view]
PROSITEPS00964. SYNDECAN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35474845.

Entry information

Entry nameB4DT61_HUMAN
AccessionPrimary (citable) accession number: B4DT61
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: March 19, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.