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Protein
Submitted name:

cDNA FLJ53425, highly similar to Far upstream element-binding protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ53425, highly similar to Far upstream element-binding protein 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiB4DT31.
MaxQBiB4DT31.
PaxDbiB4DT31.
PeptideAtlasiB4DT31.
PRIDEiB4DT31.

PTM databases

iPTMnetiB4DT31.

Expressioni

Gene expression databases

BgeeiB4DT31.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000359804.

Structurei

3D structure databases

ProteinModelPortaliB4DT31.
SMRiB4DT31. Positions 22-52, 119-468.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini121 – 18565KHInterPro annotationAdd
BLAST
Domaini206 – 27267KHInterPro annotationAdd
BLAST
Domaini296 – 36065KHInterPro annotationAdd
BLAST
Domaini397 – 46468KHInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 4 KH domains.UniRule annotation

Phylogenomic databases

eggNOGiKOG1676. Eukaryota.
ENOG410XZYE. LUCA.
HOGENOMiHOG000231552.
HOVERGENiHBG000625.
KOiK13210.
PhylomeDBiB4DT31.

Family and domain databases

Gene3Di3.30.1370.10. 4 hits.
InterProiIPR015096. DUF1897.
IPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
PfamiPF09005. DUF1897. 2 hits.
PF00013. KH_1. 4 hits.
[Graphical view]
SMARTiSM00322. KH. 4 hits.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 4 hits.
PROSITEiPS50084. KH_TYPE_1. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DT31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADYSTVPPP SSGSAGGGGG GGGGGGVNDA FKDALQRARQ IAAKIGGDAG
60 70 80 90 100
TSLNSNDYGY GGQKRPLEDG DGSWTSPSST THWEGMPSPF KDQPDAKKVA
110 120 130 140 150
PQNDSFGTQL PPMHQQQSRS VMTEEYKVPD GMVGFIIGRG GEQISRIQQE
160 170 180 190 200
SGCKIQIAPD SGGLPERSCM LTGTPESVQS AKRLLDQIVE KGRPAPGFHH
210 220 230 240 250
GDGPGNAVQE IMIPASKAGL VIGKGGETIK QLQERAGVKM VMIQDGPQNT
260 270 280 290 300
GADKPLRITG DPYKVQQAKE MVLELIRDQG GFREVRNEYG SRIGGNEGID
310 320 330 340 350
VPIPRFAVGI VIGRNGEMIK KIQNDAGVRI QFKPDDGTTP ERIAQITGPP
360 370 380 390 400
DRCQHAAEII TDLLRSVQAG NPGGPGPGGR GRGRGQGNWN MGPPGGLQEF
410 420 430 440 450
NFIVPTGKTG LIIGKGGETI KSISQQSGAR IELQRNPPPN ADPNMKLFTI
460 470 480 490 500
RGTPQQIDYA RQLIEEKIGG PVNPLGPPVP HGPHGVPGPH GPPGPPGPGT
510 520 530 540 550
PMGPYNPAPY NPGPPGPAPH GPPAPYAPQG WGNAYPHWQQ QAPPDPAKAG
560 570 580 590 600
TDPNSAAWAA YYAHYYQQQA QPPPAAPAGA PTTTQTNGQG DQQNPAPAGQ
610 620 630 640 650
VDYTKAWEEY YKKMGQAVPA PTGAPPGGQP DYSAAWAEYY RQQAAYYAQT
660
SPQGMPQHPP APQGQ
Length:665
Mass (Da):69,865
Last modified:September 23, 2008 - v1
Checksum:i5E639AFE97354D99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK300032 mRNA. Translation: BAG61843.1.
RefSeqiNP_001290362.1. NM_001303433.1.
UniGeneiHs.567380.
Hs.707742.

Genome annotation databases

GeneIDi8880.
KEGGihsa:8880.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK300032 mRNA. Translation: BAG61843.1.
RefSeqiNP_001290362.1. NM_001303433.1.
UniGeneiHs.567380.
Hs.707742.

3D structure databases

ProteinModelPortaliB4DT31.
SMRiB4DT31. Positions 22-52, 119-468.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000359804.

PTM databases

iPTMnetiB4DT31.

Proteomic databases

EPDiB4DT31.
MaxQBiB4DT31.
PaxDbiB4DT31.
PeptideAtlasiB4DT31.
PRIDEiB4DT31.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8880.
KEGGihsa:8880.

Organism-specific databases

CTDi8880.

Phylogenomic databases

eggNOGiKOG1676. Eukaryota.
ENOG410XZYE. LUCA.
HOGENOMiHOG000231552.
HOVERGENiHBG000625.
KOiK13210.
PhylomeDBiB4DT31.

Miscellaneous databases

ChiTaRSiFUBP1. human.
GenomeRNAii8880.

Gene expression databases

BgeeiB4DT31.

Family and domain databases

Gene3Di3.30.1370.10. 4 hits.
InterProiIPR015096. DUF1897.
IPR004087. KH_dom.
IPR004088. KH_dom_type_1.
[Graphical view]
PfamiPF09005. DUF1897. 2 hits.
PF00013. KH_1. 4 hits.
[Graphical view]
SMARTiSM00322. KH. 4 hits.
[Graphical view]
SUPFAMiSSF54791. SSF54791. 4 hits.
PROSITEiPS50084. KH_TYPE_1. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB4DT31_HUMAN
AccessioniPrimary (citable) accession number: B4DT31
Secondary accession number(s): E9PCF5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.