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B4DSH2 (B4DSH2_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

cDNA FLJ50193, highly similar to Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 2, mRNA EMBL BAG61634.1
Gene names
Name:CSNK1G3 Ensembl ENSP00000421998
OrganismHomo sapiens (Human) [Reference proteome] EMBL BAG61634.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length348 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B4DSH2 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 5AEB20AED88A1240

FASTA34840,729
        10         20         30         40         50         60 
MKSRAPQLHL EYRFYKQLGS GDGIPQVYYF GPCGKYNAMV LELLGPSLED LFDLCDRTFS 

        70         80         90        100        110        120 
LKTVLMIAIQ LISRMEYVHS KNLIYRDVKP ENFLIGRPGN KTQQVIHIID FGLAKEYIDP 

       130        140        150        160        170        180 
ETKKHIPYRE HKSLTGTARY MSINTHLGKE QSRRDDLEAL GHMFMYFLRG SLPWQGLKAD 

       190        200        210        220        230        240 
TLKERYQKIG DTKRATPIEV LCENFPEMAT YLRYVRRLDF FEKPDYDYLR KLFTDLFDRK 

       250        260        270        280        290        300 
GYMFDYEYDW IGKQLPTPVG AVQQDPALSS NREAHQHRDK MQQSKNQVVS STNGELNTDD 

       310        320        330        340 
PTAGRSNAPI TAPTEVEVMD ETNCQKVLNM WCCCFFKRRK RKTIQRHK 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence and comparative analysis of human chromosome 5."
Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S. expand/collapse author list , Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T., Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M., Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C., Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M., Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M., Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S., Richardson P., Lucas S.M., Myers R.M., Rubin E.M.
Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL BAG61634.1.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC008541 Genomic DNA. No translation available.
AC026422 Genomic DNA. No translation available.
AK299739 mRNA. Translation: BAG61634.1.
IPIIPI00965975.
RefSeqNP_001257502.1. NM_001270573.1.
UniGeneHs.129206.
Hs.741716.

3D structure databases

SMRB4DSH2. Positions 1-259.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000512718; ENSP00000421998; ENSG00000151292.
GeneID1456.
KEGGhsa:1456.
UCSCuc011cwr.2. human.

Organism-specific databases

CTD1456.
HGNCHGNC:2456. CSNK1G3.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000182054.
HOVERGENHBG000176.
KOK08958.
OrthoDBEOG4GHZP4.

Gene expression databases

ArrayExpressB4DSH2.

Family and domain databases

InterProIPR022247. Casein_kinase-1_gamma_C.
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_cat_dom.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamPF12605. CK1gamma_C. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SUPFAMSSF56112. Kinase_like. 1 hit.
PROSITEPS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSCSNK1G3. human.
GenomeRNAi1456.
NextBio35474664.

Entry information

Entry nameB4DSH2_HUMAN
AccessionPrimary (citable) accession number: B4DSH2
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.