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B4DSB9 (B4DSB9_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG61581.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length720 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the DNA mismatch repair MutS family. RuleBase RU003756

Ontologies

Gene Ontology (GO)
   Biological_processmismatch repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

mismatched DNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4DSB9 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 9354D1F3F157B864

FASTA72081,335
        10         20         30         40         50         60 
MIGIWHIRLL LAISLSLKTF SLVTMICQLP LVLWVLKCPQ LMARDMGKLR QIIQRGGILI 

        70         80         90        100        110        120 
TERKKADFST KDIYQDLNRL LKGKKGEQMN SAVLPEMENQ GSVEDTTGSQ SLAALLNKCK 

       130        140        150        160        170        180 
TPQGQRLVNQ WIKQPLMDKN RIEERLNLVE AFVEDAELRQ TLQEDLLRRF PDLNRLAKKF 

       190        200        210        220        230        240 
QRQAANLQDC YRLYQGINQL PNVIQALEKH EGKHQKLLLA VFVTPLTDLR SDFSKFQEMI 

       250        260        270        280        290        300 
ETTLDMDQVE NHEFLVKPSF DPNLSELREI MNDLEKKMQS TLISAARDLG LDPGKQIKLD 

       310        320        330        340        350        360 
SSAQFGYYFR VTCKEEKVLR NNKNFSTVDI QKNGVKFTNS KLTSLNEEYT KNKTEYEEAQ 

       370        380        390        400        410        420 
DAIVKEIVNI SSGYVEPMQT LNDVLAQLDA VVSFAHVSNG APVPYVRPAI LEKGQGRIIL 

       430        440        450        460        470        480 
KASRHACVEV QDEIAFIPND VYFEKDKQMF HIITGPNMGG KSTYIRQTGV IVLMAQIGCF 

       490        500        510        520        530        540 
VPCESAEVSI VDCILARVGA GDSQLKGVST FMAEMLETAS ILRSATKDSL IIIDELGRGT 

       550        560        570        580        590        600 
STYDGFGLAW AISEYIATKI GAFCMFATHF HELTALANQI PTVNNLHVTA LTTEETLTML 

       610        620        630        640        650        660 
YQVKKGVCDQ SFGIHVAELA NFPKHVIECA KQKALELEEF QYIGESQGYD IMEPAAKKCY 

       670        680        690        700        710        720 
LEREQGEKII QEFLSKVKQM PFTEMSEENI TIKLKQLKAE VIAKNNSFVN EIISRIKVTT 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Brain EMBL BAG61581.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK299667 mRNA. Translation: BAG61581.1.
UniGeneHs.597656.

3D structure databases

ProteinModelPortalB4DSB9.
SMRB4DSB9. Positions 43-716.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB4DSB9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000196498.
HOVERGENHBG006399.

Family and domain databases

InterProIPR000432. DNA_mismatch_repair_MutS_C.
IPR007861. DNA_mismatch_repair_MutS_clamp.
IPR007696. DNA_mismatch_repair_MutS_core.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF05192. MutS_III. 1 hit.
PF05190. MutS_IV. 1 hit.
PF00488. MutS_V. 1 hit.
[Graphical view]
SMARTSM00534. MUTSac. 1 hit.
SM00533. MUTSd. 1 hit.
[Graphical view]
SUPFAMSSF48334. SSF48334. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEPS00486. DNA_MISMATCH_REPAIR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35474619.

Entry information

Entry nameB4DSB9_HUMAN
AccessionPrimary (citable) accession number: B4DSB9
Secondary accession number(s): E9PCH9
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: March 19, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.