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B4DSB9

- B4DSB9_HUMAN

UniProt

B4DSB9 - B4DSB9_HUMAN

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Protein
Submitted name:

cDNA FLJ51069, highly similar to DNA mismatch repair protein Msh2

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. mismatched DNA binding Source: InterPro

GO - Biological processi

  1. mismatch repair Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ51069, highly similar to DNA mismatch repair protein Msh2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB4DSB9.

Structurei

3D structure databases

ProteinModelPortaliB4DSB9.
SMRiB4DSB9. Positions 43-716.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA mismatch repair MutS family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000196498.
HOVERGENiHBG006399.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000432. DNA_mismatch_repair_MutS_C.
IPR007861. DNA_mismatch_repair_MutS_clamp.
IPR007696. DNA_mismatch_repair_MutS_core.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF05192. MutS_III. 1 hit.
PF05190. MutS_IV. 1 hit.
PF00488. MutS_V. 1 hit.
[Graphical view]
SMARTiSM00534. MUTSac. 1 hit.
SM00533. MUTSd. 1 hit.
[Graphical view]
SUPFAMiSSF48334. SSF48334. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00486. DNA_MISMATCH_REPAIR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DSB9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIGIWHIRLL LAISLSLKTF SLVTMICQLP LVLWVLKCPQ LMARDMGKLR
60 70 80 90 100
QIIQRGGILI TERKKADFST KDIYQDLNRL LKGKKGEQMN SAVLPEMENQ
110 120 130 140 150
GSVEDTTGSQ SLAALLNKCK TPQGQRLVNQ WIKQPLMDKN RIEERLNLVE
160 170 180 190 200
AFVEDAELRQ TLQEDLLRRF PDLNRLAKKF QRQAANLQDC YRLYQGINQL
210 220 230 240 250
PNVIQALEKH EGKHQKLLLA VFVTPLTDLR SDFSKFQEMI ETTLDMDQVE
260 270 280 290 300
NHEFLVKPSF DPNLSELREI MNDLEKKMQS TLISAARDLG LDPGKQIKLD
310 320 330 340 350
SSAQFGYYFR VTCKEEKVLR NNKNFSTVDI QKNGVKFTNS KLTSLNEEYT
360 370 380 390 400
KNKTEYEEAQ DAIVKEIVNI SSGYVEPMQT LNDVLAQLDA VVSFAHVSNG
410 420 430 440 450
APVPYVRPAI LEKGQGRIIL KASRHACVEV QDEIAFIPND VYFEKDKQMF
460 470 480 490 500
HIITGPNMGG KSTYIRQTGV IVLMAQIGCF VPCESAEVSI VDCILARVGA
510 520 530 540 550
GDSQLKGVST FMAEMLETAS ILRSATKDSL IIIDELGRGT STYDGFGLAW
560 570 580 590 600
AISEYIATKI GAFCMFATHF HELTALANQI PTVNNLHVTA LTTEETLTML
610 620 630 640 650
YQVKKGVCDQ SFGIHVAELA NFPKHVIECA KQKALELEEF QYIGESQGYD
660 670 680 690 700
IMEPAAKKCY LEREQGEKII QEFLSKVKQM PFTEMSEENI TIKLKQLKAE
710 720
VIAKNNSFVN EIISRIKVTT
Length:720
Mass (Da):81,335
Last modified:September 23, 2008 - v1
Checksum:i9354D1F3F157B864
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK299667 mRNA. Translation: BAG61581.1.
UniGeneiHs.597656.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK299667 mRNA. Translation: BAG61581.1 .
UniGenei Hs.597656.

3D structure databases

ProteinModelPortali B4DSB9.
SMRi B4DSB9. Positions 43-716.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B4DSB9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOGENOMi HOG000196498.
HOVERGENi HBG006399.

Miscellaneous databases

NextBioi 35474619.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR000432. DNA_mismatch_repair_MutS_C.
IPR007861. DNA_mismatch_repair_MutS_clamp.
IPR007696. DNA_mismatch_repair_MutS_core.
IPR027417. P-loop_NTPase.
[Graphical view ]
Pfami PF05192. MutS_III. 1 hit.
PF05190. MutS_IV. 1 hit.
PF00488. MutS_V. 1 hit.
[Graphical view ]
SMARTi SM00534. MUTSac. 1 hit.
SM00533. MUTSd. 1 hit.
[Graphical view ]
SUPFAMi SSF48334. SSF48334. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEi PS00486. DNA_MISMATCH_REPAIR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiB4DSB9_HUMAN
AccessioniPrimary (citable) accession number: B4DSB9
Secondary accession number(s): E9PCH9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 1, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.