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Protein
Submitted name:

cDNA FLJ58404, highly similar to Rab proteins geranylgeranyltransferase component A 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ58404, highly similar to Rab proteins geranylgeranyltransferase component A 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiB4DRL9.
PaxDbiB4DRL9.
PeptideAtlasiB4DRL9.

Expressioni

Gene expression databases

BgeeiB4DRL9.

Interactioni

Protein-protein interaction databases

IntActiB4DRL9. 2 interactions.
STRINGi9606.ENSP00000350386.

Structurei

3D structure databases

ProteinModelPortaliB4DRL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG4405. Eukaryota.
COG5044. LUCA.
HOVERGENiHBG004961.

Family and domain databases

InterProiIPR023753. FAD/NAD-binding_dom.
IPR018203. GDP_dissociation_inhibitor.
IPR001738. Rab_escort.
[Graphical view]
PfamiPF00996. GDI. 1 hit.
[Graphical view]
PIRSFiPIRSF016550. Rab_ger_ger_transf_A_euk. 1 hit.
PRINTSiPR00893. RABESCORT.
PR00891. RABGDIREP.
SUPFAMiSSF51905. SSF51905. 2 hits.

Sequencei

Sequence statusi: Complete.

B4DRL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSCEMLTEQT PSSDPENALE VNGAEVTGEK ENHCDDKTCV PSTSAEDMSE
60 70 80 90 100
NVPIAEDTTE QPKKNRITYS QIIKEGRRFN IDLVSKLLYS RGLLIDLLIK
110 120 130 140 150
SNVSRYAEFK NITRILAFRE GRVEQVPCSR ADVFNSKQLT MVEKRMLMKF
160 170 180 190 200
LTFCMEYEKY PDEYKGYEEI TFYEYLKTQK LTPNLQYIVM HSIAMTSETA
210 220 230 240 250
SSTIDGLKAT KNFLHCLGRY GNTPFLFPLY GQGELPQCFC RMCAVFGGIY
260 270 280 290 300
CLRHSVQCLV VDKESRKCKA IIDQFGQRII SEHFLVEDSY FPENMCSRVQ
310 320 330 340 350
YRQISRAVLI TDRSVLKTDS DQQISILTVP AEEPGTFAVR VIELCSSTMT
360 370 380 390 400
CMKGTYLVHL TCTSSKTARE DLESVVQKLF VPYTEMEIEN EQVEKPRILW
410 420 430 440 450
ALYFNMRDSS DISRSCYNDL PSNVYVCSGP DCGLGNDNAV KQAETLFQEI
460 470 480 490 500
CPNEDFCPPP PNPEDIILDG DSLQPEASES SAIPEANSET FKESTNLGNL

EESSE
Length:505
Mass (Da):57,265
Last modified:September 23, 2008 - v1
Checksum:i15F801C543052012
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK299323 mRNA. Translation: BAG61331.1.
RefSeqiNP_001307888.1. NM_001320959.1.
UniGeneiHs.496449.

Genome annotation databases

GeneIDi1121.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK299323 mRNA. Translation: BAG61331.1.
RefSeqiNP_001307888.1. NM_001320959.1.
UniGeneiHs.496449.

3D structure databases

ProteinModelPortaliB4DRL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiB4DRL9. 2 interactions.
STRINGi9606.ENSP00000350386.

Proteomic databases

EPDiB4DRL9.
PaxDbiB4DRL9.
PeptideAtlasiB4DRL9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1121.

Organism-specific databases

CTDi1121.

Phylogenomic databases

eggNOGiKOG4405. Eukaryota.
COG5044. LUCA.
HOVERGENiHBG004961.

Miscellaneous databases

ChiTaRSiCHM. human.
GenomeRNAii1121.

Gene expression databases

BgeeiB4DRL9.

Family and domain databases

InterProiIPR023753. FAD/NAD-binding_dom.
IPR018203. GDP_dissociation_inhibitor.
IPR001738. Rab_escort.
[Graphical view]
PfamiPF00996. GDI. 1 hit.
[Graphical view]
PIRSFiPIRSF016550. Rab_ger_ger_transf_A_euk. 1 hit.
PRINTSiPR00893. RABESCORT.
PR00891. RABGDIREP.
SUPFAMiSSF51905. SSF51905. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB4DRL9_HUMAN
AccessioniPrimary (citable) accession number: B4DRL9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.