B4DRL8 (B4DRL8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Semaphorin-3C Ensembl ENSP00000438258

Submitted name:
cDNA FLJ50181, highly similar to Semaphorin-3C EMBL BAG61330.1

Gene names

Name:

SEMA3C Ensembl ENSP00000438258

Organism

Homo sapiens (Human) [Reference proteome] EMBL BAG61330.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	233 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 Sema domain. SAAS SAAS027231

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	B4DRL8 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 10D521391C76311A	FASTA	233	26,255
	10 20 30 40 50 60 MDQVFMIDSK CESGKGRCSF NPNVNTVSVM INEELFSGMY IDFMGTDAAI FRSLTKRNAV 70 80 90 100 110 120 RTDQHNSKWL SEPMFVDAHV IPDGTDPNDA KVYFFFKEKL TDNNRSTKQI HSMIARICPN 130 140 150 160 170 180 DTGGLRSLVN KWTTFLKARL VCSVTDEDGP ETHFDELEDV FLLETDNPRT TLVYGIFTTS 190 200 210 220 230 SSVFKGSAVC VYHLSDIQTV FNGPFAHKEG PNHQLISYQG RIPYPRPGTN TCV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence of human chromosome 7." Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K. Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"NEDO human cDNA sequencing project focused on splicing variants." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC004880 Genomic DNA. No translation available. AC004972 Genomic DNA. No translation available. AC073850 Genomic DNA. No translation available. AC093683 Genomic DNA. No translation available. AK299322 mRNA. Translation: BAG61330.1.
IPI	IPI01015562.
UniGene	Hs.269109.
3D structure databases
SMR	B4DRL8. Positions 2-229.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000536800; ENSP00000438258; ENSG00000075223.
UCSC	uc011kgx.1. human.
Organism-specific databases
HGNC	HGNC:10725. SEMA3C.
GenAtlas	Search...
Phylogenomic databases
HOVERGEN	HBG103184.
Gene expression databases
ArrayExpress	B4DRL8.
Family and domain databases
Gene3D	2.130.10.10. 1 hit.
InterPro	IPR027231. Semaphorin. IPR001627. Semaphorin/CD100_Ag. IPR015943. WD40/YVTN_repeat-like_dom. [Graphical view]
PANTHER	PTHR11036. PTHR11036. 1 hit.
Pfam	PF01403. Sema. 1 hit. [Graphical view]
SMART	SM00630. Sema. 1 hit. [Graphical view]
SUPFAM	SSF101912. Sema. 1 hit.
PROSITE	PS51004. SEMA. 1 hit. [Graphical view]
ProtoNet	Search...
Other
ChiTaRS	SEMA3C. human.
NextBio	35474419.

Entry information

Entry name

B4DRL8_HUMAN

Accession

Primary (citable) accession number: B4DRL8

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.