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Protein
Submitted name:

cDNA FLJ50838, highly similar to Apoptotic chromatin condensation inducer in thenucleus

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ50838, highly similar to Apoptotic chromatin condensation inducer in thenucleusImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134912489.

PTM / Processingi

Proteomic databases

PeptideAtlasiB4DQZ7.
PRIDEiB4DQZ7.

Expressioni

Gene expression databases

GenevisibleiB4DQZ7. HS.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 4835SAPInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili80 – 11435Sequence analysisAdd
BLAST
Coiled coili162 – 19130Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000088615.

Family and domain databases

Gene3Di1.10.720.30. 1 hit.
3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR003034. SAP_dom.
[Graphical view]
PfamiPF02037. SAP. 1 hit.
[Graphical view]
SMARTiSM00513. SAP. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50800. SAP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B4DQZ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAELEEVTLD GKPLQALRVT DLKAALEQRG LAKSGQKSAL VKRLKGALML
60 70 80 90 100
ENLQKHSTPH AAFQPNSQIG EEMSQNSFIK QYLEKQQELL RQRLEREARE
110 120 130 140 150
AAELEGKSSS ISEEKGDSDD EKPRKGERRS SRVRQARAAK LSEGSQPAEE
160 170 180 190 200
EEDQETPSRN LRVRADRNLK TEEEEEEEEE EEEDDEEEEG DDEGQKSREA
210 220 230 240 250
PILKEFKEEG EEMPRVKPEE MMDERPKTRS QEQEVLERGG RFTRSQEEAR
260 270 280 290 300
KSHLARQQQE KEMKTTSPLE EEEREIKSSQ GLKEKSKSPS PPRLTEDRKK
310 320 330 340 350
ASLVALPEQT ASEEETPPPL LTKEASSPPP HPQLHSEEEI EPMEGPAPPV
360 370 380 390 400
LIQLSPPNTD ADTRELLVPQ HTVQLVGGLS PLSSPSDTKA ESPAEKVPEE
410 420 430 440 450
SVLPLVQKST LADYSAQKDL EPESDRSAQP LPLKIEELAL AKGITEECLK
460 470 480 490 500
QPSLEQKEGR RASHTLLPSH RLKQSADSSS SRSSSSSSSS SRSRSRSPDS
510 520 530 540 550
SGSRSHSPLR SKQRDVAQAR THANPRGRPK MGSRSTSESR SRSRSRSRSR
560 570 580 590 600
SASSNSRKSL SPGVSRDSST SYTETKDPSS GQEVATPPVP QLQVCEPKER
610 620 630 640 650
TSTSSSSVQA RRLSQPESAE KHVTQRLQPE RGSPKKCEAE EAEPPAATQP
660 670 680 690 700
QTSETQTSHL PESERIHHTV EEKEEVTMDT SENRPENDVP EPPMPIADQV
710 720 730 740 750
SNDDRPEGSV EDEEKKESSL PKSFKRKISV VSATKGVPAG NSDTEGGQPG
760 770 780 790 800
RKRRWGASTA TTQKKPSISI TTESLKSLIP DIKPLAGQEA VVDLHADDSR
810 820 830 840 850
ISEDETERNG DDGTHDKGLK ICRTVTQVVP AEGQENGQRE EEEEEKEPEA
860 870 880 890 900
EPPVPPQVSV EVALPPPAEH EVKKVTLGDT LTRRSISQQK SGVSITIDDP
910 920 930 940 950
VRTAQVPSPP RGKISNIVHI SNLVRPFTLG QLKELLGRTG TLVEEAFWID
960 970 980 990 1000
KIKSHCFVTY STVEEAVATR TALHGVKWPQ SNPKFLCADY AEQDELDYHR
1010 1020 1030 1040 1050
GLLVDRPSET KTEEQGIPRP LHPPPPPPVQ PPQHPRAEQR EQERAVREQW
1060 1070 1080 1090
AEREREMERR ERTRSEREWD RDKVREGPRS RSRSRDRRRK ERAKSK
Length:1,096
Mass (Da):122,558
Last modified:September 23, 2008 - v1
Checksum:i7BB0DCE961E3C9A3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1096 – 10961Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK299034 mRNA. Translation: BAG61109.1.
RefSeqiNP_001158287.1. NM_001164815.1.
UniGeneiHs.124490.

Genome annotation databases

GeneIDi22985.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK299034 mRNA. Translation: BAG61109.1.
RefSeqiNP_001158287.1. NM_001164815.1.
UniGeneiHs.124490.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiB4DQZ7.
PRIDEiB4DQZ7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi22985.

Organism-specific databases

CTDi22985.
PharmGKBiPA134912489.

Phylogenomic databases

HOGENOMiHOG000088615.

Miscellaneous databases

GenomeRNAii22985.

Gene expression databases

GenevisibleiB4DQZ7. HS.

Family and domain databases

Gene3Di1.10.720.30. 1 hit.
3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR003034. SAP_dom.
[Graphical view]
PfamiPF02037. SAP. 1 hit.
[Graphical view]
SMARTiSM00513. SAP. 1 hit.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50800. SAP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB4DQZ7_HUMAN
AccessioniPrimary (citable) accession number: B4DQZ7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.