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Protein
Submitted name:

cDNA FLJ50612, highly similar to Rattus norvegicus tropomyosin 3, gamma (Tpm3), transcript variant 2, mRNA

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ50612, highly similar to Rattus norvegicus tropomyosin 3, gamma (Tpm3), transcript variant 2, mRNAImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PeptideAtlasiB4DQ80.
PRIDEiB4DQ80.

Structurei

3D structure databases

ProteinModelPortaliB4DQ80.
SMRiB4DQ80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili39 – 164Sequence analysisAdd BLAST126

Sequence similaritiesi

Belongs to the tropomyosin family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG107404.

Family and domain databases

InterProiIPR000533. Tropomyosin.
[Graphical view]
PfamiPF00261. Tropomyosin. 1 hit.
[Graphical view]
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiPS00326. TROPOMYOSIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DQ80-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQRSELSAS SEKLREKGGP GNRGMKVIEN RALKDEEKME LQEIQLKEAK
60 70 80 90 100
HIAEEADRKY EEVARKLVII EGDLERTEER AELAESRCRE MDEQIRLMDQ
110 120 130 140 150
NLKCLSAAEE KYSQKEDKYE EEIKILTDKL KEAETRAEFA ERSVAKLEKT
160 170 180
IDDLEDKLKC TKEEHLCTQR MLDQTLLDLN EM
Length:182
Mass (Da):21,353
Last modified:September 23, 2008 - v1
Checksum:iDC4A3CC3AA4CFACE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK298678 mRNA. Translation: BAG60842.1.
RefSeqiNP_001265117.1. NM_001278188.1.
UniGeneiHs.535581.
Hs.578978.
Hs.644306.
Hs.654421.

Genome annotation databases

GeneIDi7170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK298678 mRNA. Translation: BAG60842.1.
RefSeqiNP_001265117.1. NM_001278188.1.
UniGeneiHs.535581.
Hs.578978.
Hs.644306.
Hs.654421.

3D structure databases

ProteinModelPortaliB4DQ80.
SMRiB4DQ80.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiB4DQ80.
PRIDEiB4DQ80.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7170.

Organism-specific databases

CTDi7170.

Phylogenomic databases

HOVERGENiHBG107404.

Miscellaneous databases

GenomeRNAii7170.

Family and domain databases

InterProiIPR000533. Tropomyosin.
[Graphical view]
PfamiPF00261. Tropomyosin. 1 hit.
[Graphical view]
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiPS00326. TROPOMYOSIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4DQ80_HUMAN
AccessioniPrimary (citable) accession number: B4DQ80
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: November 2, 2016
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.