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B4DPD5 (B4DPD5_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG60547.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length308 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Molecular_functionomega peptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1251 By similarity PIRSR PIRSR013503-1
Active site1281Nucleophile By similarity PIRSR PIRSR013503-1
Active site3021 By similarity PIRSR PIRSR013503-1

Sequences

Sequence LengthMass (Da)Tools
B4DPD5 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: BFF9F3468240EC8A

FASTA30835,181
        10         20         30         40         50         60 
MCGVEGCCQG GATRRGSLPG GRQLATRKRS VVRRCLKMAA EEPQQQKQEP LGSDSEGVNC 

        70         80         90        100        110        120 
LAYDEAIMAQ QDRIQQEIAV QNPLVSERLE LSVLYKEYAE DDNIYQQKIK DLHKKYSYIR 

       130        140        150        160        170        180 
KTRPDGNCFY RAFGFSHLEA LLDDSKELQR FKAVSAKSKE DLVSQGFTEL TIEDFHNTFM 

       190        200        210        220        230        240 
DLIEQVEKQT SVADLLASFN DQSTSDYLVV YLRLLTSGYL QRESKFFEHF IEGGRTVKEF 

       250        260        270        280        290        300 
CQQEVEPMCK ESDHIHIIAL AQALSVSIQV EYMDRGEGGT TNPHIFPEGS EPKVYLLYRP 


GHYDILYK 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Kidney EMBL BAG60547.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK298287 mRNA. Translation: BAG60547.1.
UniGeneHs.473788.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActB4DPD5. 2 interactions.

Proteomic databases

PRIDEB4DPD5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000019496.
HOVERGENHBG053383.

Family and domain databases

InterProIPR003323. OTU.
IPR019400. Peptidase_C65_otubain.
IPR016615. Ubiquitin_thioesterase_Otubain.
[Graphical view]
PfamPF10275. Peptidase_C65. 1 hit.
[Graphical view]
PIRSFPIRSF013503. Ubiquitin_thioesterase_Otubain. 1 hit.
PROSITEPS50802. OTU. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35473846.

Entry information

Entry nameB4DPD5_HUMAN
AccessionPrimary (citable) accession number: B4DPD5
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.