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B4DPD5

- B4DPD5_HUMAN

UniProt

B4DPD5 - B4DPD5_HUMAN

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Protein
Submitted name: cDNA FLJ56307, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-)
Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei125 – 1251 By similarityUniRule annotation
Active sitei128 – 1281Nucleophile By similarityUniRule annotation
Active sitei302 – 3021 By similarityUniRule annotation

GO - Molecular functioni

  1. omega peptidase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ56307, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB4DPD5.

Interactioni

Protein-protein interaction databases

IntActiB4DPD5. 2 interactions.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000019496.
HOVERGENiHBG053383.

Family and domain databases

InterProiIPR003323. OTU.
IPR019400. Peptidase_C65_otubain.
IPR016615. Ubiquitin_thioesterase_Otubain.
[Graphical view]
PfamiPF10275. Peptidase_C65. 1 hit.
[Graphical view]
PIRSFiPIRSF013503. Ubiquitin_thioesterase_Otubain. 1 hit.
PROSITEiPS50802. OTU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DPD5-1 [UniParc]FASTAAdd to Basket

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MCGVEGCCQG GATRRGSLPG GRQLATRKRS VVRRCLKMAA EEPQQQKQEP    50
LGSDSEGVNC LAYDEAIMAQ QDRIQQEIAV QNPLVSERLE LSVLYKEYAE 100
DDNIYQQKIK DLHKKYSYIR KTRPDGNCFY RAFGFSHLEA LLDDSKELQR 150
FKAVSAKSKE DLVSQGFTEL TIEDFHNTFM DLIEQVEKQT SVADLLASFN 200
DQSTSDYLVV YLRLLTSGYL QRESKFFEHF IEGGRTVKEF CQQEVEPMCK 250
ESDHIHIIAL AQALSVSIQV EYMDRGEGGT TNPHIFPEGS EPKVYLLYRP 300
GHYDILYK 308
Length:308
Mass (Da):35,181
Last modified:September 23, 2008 - v1
Checksum:iBFF9F3468240EC8A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK298287 mRNA. Translation: BAG60547.1.
UniGeneiHs.473788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK298287 mRNA. Translation: BAG60547.1 .
UniGenei Hs.473788.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi B4DPD5. 2 interactions.

Proteomic databases

PRIDEi B4DPD5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOGENOMi HOG000019496.
HOVERGENi HBG053383.

Miscellaneous databases

NextBioi 35473846.

Family and domain databases

InterProi IPR003323. OTU.
IPR019400. Peptidase_C65_otubain.
IPR016615. Ubiquitin_thioesterase_Otubain.
[Graphical view ]
Pfami PF10275. Peptidase_C65. 1 hit.
[Graphical view ]
PIRSFi PIRSF013503. Ubiquitin_thioesterase_Otubain. 1 hit.
PROSITEi PS50802. OTU. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: KidneyImported.

Entry informationi

Entry nameiB4DPD5_HUMAN
AccessioniPrimary (citable) accession number: B4DPD5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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