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B4DPD5

- B4DPD5_HUMAN

UniProt

B4DPD5 - B4DPD5_HUMAN

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Protein
Submitted name: cDNA FLJ56307, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-)
Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei125 – 1251 By similarityUniRule annotation
Active sitei128 – 1281Nucleophile By similarityUniRule annotation
Active sitei302 – 3021 By similarityUniRule annotation

GO - Molecular functioni

  1. omega peptidase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ56307, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-)Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PRIDEiB4DPD5.

    Interactioni

    Protein-protein interaction databases

    IntActiB4DPD5. 2 interactions.

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000019496.
    HOVERGENiHBG053383.

    Family and domain databases

    InterProiIPR003323. OTU.
    IPR019400. Peptidase_C65_otubain.
    IPR016615. Ubiquitin_thioesterase_Otubain.
    [Graphical view]
    PfamiPF10275. Peptidase_C65. 1 hit.
    [Graphical view]
    PIRSFiPIRSF013503. Ubiquitin_thioesterase_Otubain. 1 hit.
    PROSITEiPS50802. OTU. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4DPD5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MCGVEGCCQG GATRRGSLPG GRQLATRKRS VVRRCLKMAA EEPQQQKQEP    50
    LGSDSEGVNC LAYDEAIMAQ QDRIQQEIAV QNPLVSERLE LSVLYKEYAE 100
    DDNIYQQKIK DLHKKYSYIR KTRPDGNCFY RAFGFSHLEA LLDDSKELQR 150
    FKAVSAKSKE DLVSQGFTEL TIEDFHNTFM DLIEQVEKQT SVADLLASFN 200
    DQSTSDYLVV YLRLLTSGYL QRESKFFEHF IEGGRTVKEF CQQEVEPMCK 250
    ESDHIHIIAL AQALSVSIQV EYMDRGEGGT TNPHIFPEGS EPKVYLLYRP 300
    GHYDILYK 308
    Length:308
    Mass (Da):35,181
    Last modified:September 23, 2008 - v1
    Checksum:iBFF9F3468240EC8A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK298287 mRNA. Translation: BAG60547.1.
    UniGeneiHs.473788.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK298287 mRNA. Translation: BAG60547.1 .
    UniGenei Hs.473788.

    3D structure databases

    ModBasei Search...

    Protein-protein interaction databases

    IntActi B4DPD5. 2 interactions.

    Proteomic databases

    PRIDEi B4DPD5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOGENOMi HOG000019496.
    HOVERGENi HBG053383.

    Miscellaneous databases

    NextBioi 35473846.

    Family and domain databases

    InterProi IPR003323. OTU.
    IPR019400. Peptidase_C65_otubain.
    IPR016615. Ubiquitin_thioesterase_Otubain.
    [Graphical view ]
    Pfami PF10275. Peptidase_C65. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF013503. Ubiquitin_thioesterase_Otubain. 1 hit.
    PROSITEi PS50802. OTU. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "NEDO human cDNA sequencing project focused on splicing variants."
      Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
      , Sugano S., Nomura N., Isogai T.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: KidneyImported.

    Entry informationi

    Entry nameiB4DPD5_HUMAN
    AccessioniPrimary (citable) accession number: B4DPD5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: June 11, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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