B4DPD5 (B4DPD5_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: cDNA FLJ56307, highly similar to Ubiquitin thioesterase protein OTUB1 (EC 3.4.-.-) EMBL BAG60547.1
Organism	Homo sapiens (Human) EMBL BAG60547.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	308 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	protein metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	omega peptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4DPD5 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: BFF9F3468240EC8A	FASTA	308	35,181
	10 20 30 40 50 60 MCGVEGCCQG GATRRGSLPG GRQLATRKRS VVRRCLKMAA EEPQQQKQEP LGSDSEGVNC 70 80 90 100 110 120 LAYDEAIMAQ QDRIQQEIAV QNPLVSERLE LSVLYKEYAE DDNIYQQKIK DLHKKYSYIR 130 140 150 160 170 180 KTRPDGNCFY RAFGFSHLEA LLDDSKELQR FKAVSAKSKE DLVSQGFTEL TIEDFHNTFM 190 200 210 220 230 240 DLIEQVEKQT SVADLLASFN DQSTSDYLVV YLRLLTSGYL QRESKFFEHF IEGGRTVKEF 250 260 270 280 290 300 CQQEVEPMCK ESDHIHIIAL AQALSVSIQV EYMDRGEGGT TNPHIFPEGS EPKVYLLYRP GHYDILYK

References

[1]

"NEDO human cDNA sequencing project focused on splicing variants." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Kidney EMBL BAG60547.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK298287 mRNA. Translation: BAG60547.1.
IPI	IPI00000581.
UniGene	Hs.473788.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	B4DPD5. 2 interactions.
STRING	B4DPD5.
Proteomic databases
PRIDE	B4DPD5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOGENOM	HOG000019496.
HOVERGEN	HBG053383.
Family and domain databases
InterPro	IPR003323. OTU. IPR019400. Peptidase_C65_otubain. IPR016615. Ubiquitin_thioesterase_Otubain. [Graphical view]
Pfam	PF10275. Peptidase_C65. 1 hit. [Graphical view]
PIRSF	PIRSF013503. Ubiquitin_thioesterase_Otubain. 1 hit.
PROSITE	PS50802. OTU. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35473846.

Entry information

Entry name

B4DPD5_HUMAN

Accession

Primary (citable) accession number: B4DPD5

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	April 3, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.