Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Probable global transcription activator SNF2L2

Gene

SMARCA2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Probable global transcription activator SNF2L2Imported
Submitted name:
cDNA FLJ61143, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-)Imported
Gene namesi
Name:SMARCA2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

HGNCiHGNC:11098. SMARCA2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 276252Sequence analysisPRO_5007640658Add
BLAST

Proteomic databases

PeptideAtlasiB4DNT1.

Expressioni

Gene expression databases

BgeeiENSG00000080503.

Structurei

3D structure databases

ProteinModelPortaliF6XG14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini105 – 17571BromoInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili185 – 21531Sequence analysisAdd
BLAST

Keywords - Domaini

BromodomainSAAS annotation, Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00550000074659.
HOGENOMiHOG000049057.
HOVERGENiHBG062263.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR030088. SMARCA2.
[Graphical view]
PANTHERiPTHR10799:SF541. PTHR10799:SF541. 2 hits.
PfamiPF00439. Bromodomain. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DNT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRLAARCFA GLLILSPLTV ISDSRPADSG KAIEDGNLEE MEEEVRLKKR
60 70 80 90 100
KRRRNVDKDP AKEDVEKAKK RRGRPPAEKL SPNPPKLTKQ MNAIIDTVIN
110 120 130 140 150
YKDSSGRQLS EVFIQLPSRK ELPEYYELIR KPVDFKKIKE RIRNHKYRSL
160 170 180 190 200
GDLEKDVMLL CHNAQTFNLE GSQIYEDSIV LQSVFKSARQ KIAKEEESED
210 220 230 240 250
ESNEEEEEED EEESESEAKS VKVKIKLNKK DDKGRDKGKG KKRPNRGKAK
260 270
PVVSDFDSDE EQDEREQSEG SGTDDE
Length:276
Mass (Da):31,735
Last modified:September 23, 2008 - v1
Checksum:iE7B935AD63F97B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138755 Genomic DNA. No translation available.
AL359076 Genomic DNA. No translation available.
AK298045 mRNA. Translation: BAG60343.1.
RefSeqiNP_001276328.1. NM_001289399.1.
NP_001276329.1. NM_001289400.1.
UniGeneiHs.298990.
Hs.644901.

Genome annotation databases

EnsembliENST00000382185; ENSP00000371620; ENSG00000080503.
ENST00000417599; ENSP00000387486; ENSG00000080503.
GeneIDi6595.
UCSCiuc064rwj.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138755 Genomic DNA. No translation available.
AL359076 Genomic DNA. No translation available.
AK298045 mRNA. Translation: BAG60343.1.
RefSeqiNP_001276328.1. NM_001289399.1.
NP_001276329.1. NM_001289400.1.
UniGeneiHs.298990.
Hs.644901.

3D structure databases

ProteinModelPortaliF6XG14.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiB4DNT1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000382185; ENSP00000371620; ENSG00000080503.
ENST00000417599; ENSP00000387486; ENSG00000080503.
GeneIDi6595.
UCSCiuc064rwj.1. human.

Organism-specific databases

CTDi6595.
HGNCiHGNC:11098. SMARCA2.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00550000074659.
HOGENOMiHOG000049057.
HOVERGENiHBG062263.

Miscellaneous databases

ChiTaRSiSMARCA2. human.
GenomeRNAii6595.

Gene expression databases

BgeeiENSG00000080503.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR030088. SMARCA2.
[Graphical view]
PANTHERiPTHR10799:SF541. PTHR10799:SF541. 2 hits.
PfamiPF00439. Bromodomain. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4DNT1_HUMAN
AccessioniPrimary (citable) accession number: B4DNT1
Secondary accession number(s): F6XG14
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 7, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.