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Protein
Submitted name:

Probable global transcription activator SNF2L2

Gene

SMARCA2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Probable global transcription activator SNF2L2Imported
Submitted name:
cDNA FLJ61143, highly similar to Probable global transcription activator SNF2L2 (EC 3.6.1.-)Imported
Gene namesi
Name:SMARCA2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

EuPathDBiHostDB:ENSG00000080503.20.
HGNCiHGNC:11098. SMARCA2.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000080503.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_501010543625 – 276Sequence analysisAdd BLAST252

Expressioni

Gene expression databases

BgeeiENSG00000080503.
ExpressionAtlasiB4DNT1. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 175BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili185 – 215Sequence analysisAdd BLAST31

Keywords - Domaini

BromodomainPROSITE-ProRule annotationSAAS annotation, Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00550000074659.
HOGENOMiHOG000049057.
HOVERGENiHBG062263.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiView protein in InterPro
IPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
PfamiView protein in Pfam
PF00439. Bromodomain. 1 hit.
PRINTSiPR00503. BROMODOMAIN.
SMARTiView protein in SMART
SM00297. BROMO. 1 hit.
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiView protein in PROSITE
PS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

B4DNT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRLAARCFA GLLILSPLTV ISDSRPADSG KAIEDGNLEE MEEEVRLKKR
60 70 80 90 100
KRRRNVDKDP AKEDVEKAKK RRGRPPAEKL SPNPPKLTKQ MNAIIDTVIN
110 120 130 140 150
YKDSSGRQLS EVFIQLPSRK ELPEYYELIR KPVDFKKIKE RIRNHKYRSL
160 170 180 190 200
GDLEKDVMLL CHNAQTFNLE GSQIYEDSIV LQSVFKSARQ KIAKEEESED
210 220 230 240 250
ESNEEEEEED EEESESEAKS VKVKIKLNKK DDKGRDKGKG KKRPNRGKAK
260 270
PVVSDFDSDE EQDEREQSEG SGTDDE
Length:276
Mass (Da):31,735
Last modified:September 23, 2008 - v1
Checksum:iE7B935AD63F97B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138755 Genomic DNA. No translation available.
AL359076 Genomic DNA. No translation available.
AL591644 Genomic DNA. No translation available.
AK298045 mRNA. Translation: BAG60343.1.
RefSeqiNP_001276328.1. NM_001289399.1.
NP_001276329.1. NM_001289400.1.
UniGeneiHs.298990.
Hs.644901.

Genome annotation databases

EnsembliENST00000382185; ENSP00000371620; ENSG00000080503.
ENST00000417599; ENSP00000387486; ENSG00000080503.
GeneIDi6595.
UCSCiuc064rwj.1. human.

Similar proteinsi

Entry informationi

Entry nameiB4DNT1_HUMAN
AccessioniPrimary (citable) accession number: B4DNT1
Secondary accession number(s): F6XG14
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 27, 2017
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported