Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B4DN52

- B4DN52_HUMAN

UniProt

B4DN52 - B4DN52_HUMAN

Protein
Submitted name:

cDNA FLJ55990, highly similar to LIM domain and actin-binding protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. zinc ion binding Source: InterPro

    GO - Biological processi

    1. actin filament bundle assembly Source: InterPro
    2. negative regulation of actin filament depolymerization Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ55990, highly similar to LIM domain and actin-binding protein 1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PRIDEiB4DN52.

    Interactioni

    Protein-protein interaction databases

    IntActiB4DN52. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliB4DN52.
    SMRiB4DN52. Positions 300-379.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 LIM zinc-binding domain.UniRule annotation

    Keywords - Domaini

    LIM domainUniRule annotationSAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000059621.
    HOVERGENiHBG051492.

    Family and domain databases

    Gene3Di2.10.110.10. 1 hit.
    InterProiIPR028740. EPLIN.
    IPR001781. Znf_LIM.
    [Graphical view]
    PANTHERiPTHR24206:SF27. PTHR24206:SF27. 1 hit.
    PfamiPF00412. LIM. 1 hit.
    [Graphical view]
    SMARTiSM00132. LIM. 1 hit.
    [Graphical view]
    PROSITEiPS00478. LIM_DOMAIN_1. 1 hit.
    PS50023. LIM_DOMAIN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4DN52-1 [UniParc]FASTAAdd to Basket

    « Hide

    MWQGCNCSQL SETAVDQEQL GVLTFILQRT TCLNVSADQE EQIHPRSRLR    50
    SPPEALVQGR YPHIKDGEDL KDHSTESKKM ENCLGESRHE VEKSEISENT 100
    DASGKIEKYN VPLNRLKMMF EKGEPTQTKI LRAQSRSASG RKISENSYSL 150
    DDLEIGPGQL SSSTFDSEKN ESRRNLELPR LSETSIKDRM AKYQAAVSKQ 200
    SSSTNYTNEL KASGGEIKIH KMEQKENVPP GPEVCITHQE GEKISANENS 250
    LAVRSTPAED DSRDSQVKSE VQQPVHPKPL SPDSRASSLS ESSPPKAMKK 300
    FQAPARETCV ECQKTVYPME RLLANQQVFH ISCFRCSYCN NKLSLGTYAS 350
    LHGRIYCKPH FNQLFKSKGN YDEGFGHRPH KDLWASKNEN EEILERPAQL 400
    ANARETPHSP GVEDAPIAKV GVLAASMEAK ASSQQEKEDK PAETKKLRIA 450
    WPPPTELGSS GSALEEGIKM SKPKWPPEDE ISKPEVPEDV DLDLKKLRRS 500
    SSLKERSRPF TVAASFQSTS VKSPKTVSPP IRKGWSMSEQ SEESVGGRVA 550
    ERKQVENAKA SKKNGNVGKT TWQNKESKGE TGKRSKEGHS LEMENENLVE 600
    NGADSDEDDN SFLKQQSPQE PKSLNWSSFV DNTFAEEFTT QNQKSQDVEL 650
    WEGEVVKELS VEEQIKRNRY YDEDEDEE 678
    Length:678
    Mass (Da):76,080
    Last modified:September 23, 2008 - v1
    Checksum:iB7A2CDFFFC680190
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK297766 mRNA. Translation: BAG60114.1.
    UniGeneiHs.525419.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK297766 mRNA. Translation: BAG60114.1 .
    UniGenei Hs.525419.

    3D structure databases

    ProteinModelPortali B4DN52.
    SMRi B4DN52. Positions 300-379.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi B4DN52. 1 interaction.

    Proteomic databases

    PRIDEi B4DN52.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOGENOMi HOG000059621.
    HOVERGENi HBG051492.

    Miscellaneous databases

    NextBioi 35473512.

    Family and domain databases

    Gene3Di 2.10.110.10. 1 hit.
    InterProi IPR028740. EPLIN.
    IPR001781. Znf_LIM.
    [Graphical view ]
    PANTHERi PTHR24206:SF27. PTHR24206:SF27. 1 hit.
    Pfami PF00412. LIM. 1 hit.
    [Graphical view ]
    SMARTi SM00132. LIM. 1 hit.
    [Graphical view ]
    PROSITEi PS00478. LIM_DOMAIN_1. 1 hit.
    PS50023. LIM_DOMAIN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "NEDO human cDNA sequencing project focused on splicing variants."
      Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
      , Sugano S., Nomura N., Isogai T.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiB4DN52_HUMAN
    AccessioniPrimary (citable) accession number: B4DN52
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.