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B4DN52 (B4DN52_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG60114.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length678 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 LIM zinc-binding domain. RuleBase RU000350

Sequences

Sequence LengthMass (Da)Tools
B4DN52 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: B7A2CDFFFC680190

FASTA67876,080
        10         20         30         40         50         60 
MWQGCNCSQL SETAVDQEQL GVLTFILQRT TCLNVSADQE EQIHPRSRLR SPPEALVQGR 

        70         80         90        100        110        120 
YPHIKDGEDL KDHSTESKKM ENCLGESRHE VEKSEISENT DASGKIEKYN VPLNRLKMMF 

       130        140        150        160        170        180 
EKGEPTQTKI LRAQSRSASG RKISENSYSL DDLEIGPGQL SSSTFDSEKN ESRRNLELPR 

       190        200        210        220        230        240 
LSETSIKDRM AKYQAAVSKQ SSSTNYTNEL KASGGEIKIH KMEQKENVPP GPEVCITHQE 

       250        260        270        280        290        300 
GEKISANENS LAVRSTPAED DSRDSQVKSE VQQPVHPKPL SPDSRASSLS ESSPPKAMKK 

       310        320        330        340        350        360 
FQAPARETCV ECQKTVYPME RLLANQQVFH ISCFRCSYCN NKLSLGTYAS LHGRIYCKPH 

       370        380        390        400        410        420 
FNQLFKSKGN YDEGFGHRPH KDLWASKNEN EEILERPAQL ANARETPHSP GVEDAPIAKV 

       430        440        450        460        470        480 
GVLAASMEAK ASSQQEKEDK PAETKKLRIA WPPPTELGSS GSALEEGIKM SKPKWPPEDE 

       490        500        510        520        530        540 
ISKPEVPEDV DLDLKKLRRS SSLKERSRPF TVAASFQSTS VKSPKTVSPP IRKGWSMSEQ 

       550        560        570        580        590        600 
SEESVGGRVA ERKQVENAKA SKKNGNVGKT TWQNKESKGE TGKRSKEGHS LEMENENLVE 

       610        620        630        640        650        660 
NGADSDEDDN SFLKQQSPQE PKSLNWSSFV DNTFAEEFTT QNQKSQDVEL WEGEVVKELS 

       670 
VEEQIKRNRY YDEDEDEE 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK297766 mRNA. Translation: BAG60114.1.
UniGeneHs.525419.

3D structure databases

ProteinModelPortalB4DN52.
SMRB4DN52. Positions 300-379.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActB4DN52. 1 interaction.

Proteomic databases

PRIDEB4DN52.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOGENOMHOG000059621.
HOVERGENHBG051492.

Family and domain databases

Gene3D2.10.110.10. 1 hit.
InterProIPR028740. EPLIN.
IPR001781. Znf_LIM.
[Graphical view]
PANTHERPTHR24206:SF5. PTHR24206:SF5. 1 hit.
PfamPF00412. LIM. 1 hit.
[Graphical view]
SMARTSM00132. LIM. 1 hit.
[Graphical view]
PROSITEPS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35473512.

Entry information

Entry nameB4DN52_HUMAN
AccessionPrimary (citable) accession number: B4DN52
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.