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B4DN52

- B4DN52_HUMAN

UniProt

B4DN52 - B4DN52_HUMAN

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Protein
Submitted name:

cDNA FLJ55990, highly similar to LIM domain and actin-binding protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. zinc ion binding Source: InterPro

GO - Biological processi

  1. actin filament bundle assembly Source: InterPro
  2. negative regulation of actin filament depolymerization Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ55990, highly similar to LIM domain and actin-binding protein 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB4DN52.

Interactioni

Protein-protein interaction databases

IntActiB4DN52. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliB4DN52.
SMRiB4DN52. Positions 300-379.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 LIM zinc-binding domain.UniRule annotation

Keywords - Domaini

LIM domainUniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000059621.
HOVERGENiHBG051492.

Family and domain databases

Gene3Di2.10.110.10. 1 hit.
InterProiIPR028740. EPLIN.
IPR001781. Znf_LIM.
[Graphical view]
PANTHERiPTHR24206:SF27. PTHR24206:SF27. 1 hit.
PfamiPF00412. LIM. 1 hit.
[Graphical view]
SMARTiSM00132. LIM. 1 hit.
[Graphical view]
PROSITEiPS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DN52-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MWQGCNCSQL SETAVDQEQL GVLTFILQRT TCLNVSADQE EQIHPRSRLR
60 70 80 90 100
SPPEALVQGR YPHIKDGEDL KDHSTESKKM ENCLGESRHE VEKSEISENT
110 120 130 140 150
DASGKIEKYN VPLNRLKMMF EKGEPTQTKI LRAQSRSASG RKISENSYSL
160 170 180 190 200
DDLEIGPGQL SSSTFDSEKN ESRRNLELPR LSETSIKDRM AKYQAAVSKQ
210 220 230 240 250
SSSTNYTNEL KASGGEIKIH KMEQKENVPP GPEVCITHQE GEKISANENS
260 270 280 290 300
LAVRSTPAED DSRDSQVKSE VQQPVHPKPL SPDSRASSLS ESSPPKAMKK
310 320 330 340 350
FQAPARETCV ECQKTVYPME RLLANQQVFH ISCFRCSYCN NKLSLGTYAS
360 370 380 390 400
LHGRIYCKPH FNQLFKSKGN YDEGFGHRPH KDLWASKNEN EEILERPAQL
410 420 430 440 450
ANARETPHSP GVEDAPIAKV GVLAASMEAK ASSQQEKEDK PAETKKLRIA
460 470 480 490 500
WPPPTELGSS GSALEEGIKM SKPKWPPEDE ISKPEVPEDV DLDLKKLRRS
510 520 530 540 550
SSLKERSRPF TVAASFQSTS VKSPKTVSPP IRKGWSMSEQ SEESVGGRVA
560 570 580 590 600
ERKQVENAKA SKKNGNVGKT TWQNKESKGE TGKRSKEGHS LEMENENLVE
610 620 630 640 650
NGADSDEDDN SFLKQQSPQE PKSLNWSSFV DNTFAEEFTT QNQKSQDVEL
660 670
WEGEVVKELS VEEQIKRNRY YDEDEDEE
Length:678
Mass (Da):76,080
Last modified:September 23, 2008 - v1
Checksum:iB7A2CDFFFC680190
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK297766 mRNA. Translation: BAG60114.1.
UniGeneiHs.525419.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK297766 mRNA. Translation: BAG60114.1 .
UniGenei Hs.525419.

3D structure databases

ProteinModelPortali B4DN52.
SMRi B4DN52. Positions 300-379.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi B4DN52. 1 interaction.

Proteomic databases

PRIDEi B4DN52.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOGENOMi HOG000059621.
HOVERGENi HBG051492.

Miscellaneous databases

NextBioi 35473512.

Family and domain databases

Gene3Di 2.10.110.10. 1 hit.
InterProi IPR028740. EPLIN.
IPR001781. Znf_LIM.
[Graphical view ]
PANTHERi PTHR24206:SF27. PTHR24206:SF27. 1 hit.
Pfami PF00412. LIM. 1 hit.
[Graphical view ]
SMARTi SM00132. LIM. 1 hit.
[Graphical view ]
PROSITEi PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB4DN52_HUMAN
AccessioniPrimary (citable) accession number: B4DN52
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 1, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.