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Protein
Submitted name:

cDNA FLJ53358, highly similar to Heterogeneous nuclear ribonucleoprotein R

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoproteinImported, RNA-bindingPROSITE-ProRule annotation, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ53358, highly similar to Heterogeneous nuclear ribonucleoprotein RImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Keywords - Cellular componenti

Virion

PTM / Processingi

Proteomic databases

MaxQBiB4DMB1.
PeptideAtlasiB4DMB1.
PRIDEiB4DMB1.

Structurei

3D structure databases

ProteinModelPortaliB4DMB1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini127 – 206RRMInterPro annotationAdd BLAST80
Domaini208 – 290RRMInterPro annotationAdd BLAST83
Domaini303 – 373RRMInterPro annotationAdd BLAST71

Phylogenomic databases

HOGENOMiHOG000186082.
HOVERGENiHBG051917.

Family and domain databases

CDDicd12488. RRM2_hnRNPR. 1 hit.
InterProiView protein in InterPro
IPR006535. HnRNP_R/Q_splicing_fac.
IPR034411. hnRNPR_RRM2.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 3 hits.
SMARTiView protein in SMART
SM00360. RRM. 3 hits.
SUPFAMiSSF54928. SSF54928. 3 hits.
TIGRFAMsiTIGR01648. hnRNP-R-Q. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 3 hits.

Sequencei

Sequence statusi: Complete.

B4DMB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANQVNGNAV QLKEEEEPMD TSSVTHTEHY KTLIEAGLPQ KVAERLDEIF
60 70 80 90 100
QTGLVAYVDL DERAIDALRE FNEEGALSVL QQFKESDLSH VQNKSAFLCG
110 120 130 140 150
VMKTYRQREK QGSRVQESTK GPDEAKIKVF VGKIPRDLYE DELVPLFEKA
160 170 180 190 200
GPIWDLRLMM DPLSGQNRGY AFITFCGKEA AQEAVKLCDS YEIRPGKHLG
210 220 230 240 250
VCISVANNRL FVGSIPKNKT KENILEEFSK VTEGLVDVIL YHQPDDKKKN
260 270 280 290 300
RGFCFLEYED HKSAAQARRR LMSGKVKVWG NVVTVEWADP VEEPDPEVMA
310 320 330 340 350
KVKVLFVRNL ATTVTEEILE KSFSEFGKLE RVKKLKDYAF VHFEDRGAAV
360 370 380 390 400
KAMDEMNGKE IEGEEIEIVL AKPPDKKRKE RQAARQASRS TAYEDYYYHP
410 420 430 440 450
PPRMPPPIRG RGRGGGRGGY GYPPDYYGYE DYYDDYYGYD YHDYRGGYED
460 470 480 490 500
PYYGYDDGYA VRGRGGGRGG RGAPPPPRGR GAPPPRGRAG YSQRGAPLGP
510 520 530 540 550
PRGSRGGRGG PAQQQRGRGS RGSRGNRGGN VGGKRKADGY NQPDSKRRQT
560 570 580 590
NNQQNWGSQP IAQQPLQQGG DYSGNYGYNN DNQEFYQDTY GQQWK
Length:595
Mass (Da):67,008
Last modified:September 23, 2008 - v1
Checksum:iA59B0DF02D3BAD17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK297382 mRNA. Translation: BAG59823.1.
RefSeqiNP_001284549.1. NM_001297620.1.
UniGeneiHs.373763.

Genome annotation databases

GeneIDi10236.

Similar proteinsi

Entry informationi

Entry nameiB4DMB1_HUMAN
AccessioniPrimary (citable) accession number: B4DMB1
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 25, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.