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B4DK19 (B4DK19_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG59031.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length514 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
B4DK19 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: EC5E116DD8D6AAF9

FASTA51458,110
        10         20         30         40         50         60 
MGPSCPVFLS FTKLSLWWLL LTPAGGEEAK RPPPRAPGDP LSSPSPTALP QGGSHTETED 

        70         80         90        100        110        120 
RLFKHLFRGY NRWARPVPNT SDVDEKNQMM TTNVWLKQEW SDYKLRWNPA DFGNITSLRV 

       130        140        150        160        170        180 
PSEMIWIPDI VLYNNADGEF AVTHMTKAHL FSTGTVHWVP PAIYKSSCSI DVTFFPFDQQ 

       190        200        210        220        230        240 
NCKMKFGSWT YDKAKIDLEQ MEQTVDLKDY WESGEWAIVN ATGTYNSKKY DCCAEIYPDV 

       250        260        270        280        290        300 
TYAFVIRRLP LFYTINLIIP CLLISCLTVL VFYLPSDCGE KITLCISVLL SLTVFLLLIT 

       310        320        330        340        350        360 
EIIPSTSLVI PLIGEYLLFT MIFVTLSIVI TVFVLNVHHR SPSTHTMPHW VRGALLGCVP 

       370        380        390        400        410        420 
RWLLMNRPPP PVELCHPLRL KLSPSYHWLE SNVDAEEREV VVEEEDRWAC AGHVAPSVGT 

       430        440        450        460        470        480 
LCSHGHLHSG ASGPKAEALL QEGELLLSPH MQKALEGVHY IADHLRSEDA DSSVKEDWKY 

       490        500        510 
VAMVIDRIFL WLFIIVCFLG TIGLFLPPFL AGMI 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Thalamus EMBL BAG59031.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK296348 mRNA. Translation: BAG59031.1.
RefSeqNP_001269384.1. NM_001282455.1.
UniGeneHs.57718.

3D structure databases

ProteinModelPortalB4DK19.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1135.
KEGGhsa:1135.

Organism-specific databases

CTD1135.

Phylogenomic databases

HOVERGENHBG003756.
KOK04804.

Family and domain databases

Gene3D1.20.120.370. 2 hits.
2.70.170.10. 1 hit.
InterProIPR027361. Acetylcholine_rcpt_TM.
IPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
IPR002394. Nicotinic_acetylcholine_rcpt.
[Graphical view]
PANTHERPTHR18945. PTHR18945. 1 hit.
PfamPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSPR00254. NICOTINICR.
PR00252. NRIONCHANNEL.
SUPFAMSSF63712. SSF63712. 1 hit.
SSF90112. SSF90112. 1 hit.
TIGRFAMsTIGR00860. LIC. 1 hit.
PROSITEPS00236. NEUROTR_ION_CHANNEL. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi1135.
NextBio35472674.

Entry information

Entry nameB4DK19_HUMAN
AccessionPrimary (citable) accession number: B4DK19
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.