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Protein
Submitted name:

cDNA FLJ50016, highly similar to Acyl-CoA-binding domain-containing protein 4

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ50016, highly similar to Acyl-CoA-binding domain-containing protein 4Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134897893.

PTM / Processingi

Proteomic databases

PRIDEiB4DJP3.

Family & Domainsi

Sequence similaritiesi

Contains ACB (acyl-CoA-binding) domain.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000231479.
HOVERGENiHBG028530.

Family and domain databases

Gene3Di1.20.80.10. 1 hit.
InterProiIPR022408. Acyl-CoA-binding_prot_CS.
IPR000582. Acyl-CoA-binding_protein.
IPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
[Graphical view]
PfamiPF00887. ACBP. 1 hit.
[Graphical view]
PRINTSiPR00689. ACOABINDINGP.
SUPFAMiSSF47027. SSF47027. 1 hit.
PROSITEiPS00880. ACB_1. 1 hit.
PS51228. ACB_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DJP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTEKESPEP DCQKQFQAAV SVIQNLPKNG SYRPSYEEML RFYSYYKQAT
60 70 80 90 100
MGPCLVPRPG FWDPIGRYKW DAWNSLGKMS REEAMSAYIT EMKLVAQKVI
110 120 130 140 150
DTVPLGEVAE DMFGYFEPLY QVIPDMPRPP ETFLRRVTGW KEQVVNGDVG
160 170 180 190 200
AVSEPPCLPK EPAPPSPASL WAVTLPTPPQ SPIHPGTWTP RFSVIPWSSW
210 220 230 240 250
SLSWFGQSSG QHLEESVIPG TAPCPPQRKR GCGAARRGPR SWTCGCWGQF
260 270 280 290 300
EHYRRACRRC RRGCRAWRAC PGPLSRGRSP GPVLGHGPLG SRGPRCSSSS
310 320 330 340
CGPSSSSGSS ECFGPKRGDC QWRGLCSQLR LSRCALSLPR V
Length:341
Mass (Da):37,839
Last modified:September 23, 2008 - v1
Checksum:iFAEC8088514D8F23
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK296167 mRNA. Translation: BAG58905.1.
RefSeqiNP_001129178.1. NM_001135706.1.
UniGeneiHs.110298.

Genome annotation databases

GeneIDi79777.
KEGGihsa:79777.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK296167 mRNA. Translation: BAG58905.1.
RefSeqiNP_001129178.1. NM_001135706.1.
UniGeneiHs.110298.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB4DJP3.

Protocols and materials databases

DNASUi79777.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi79777.
KEGGihsa:79777.

Organism-specific databases

CTDi79777.
PharmGKBiPA134897893.

Phylogenomic databases

HOGENOMiHOG000231479.
HOVERGENiHBG028530.

Miscellaneous databases

GenomeRNAii79777.
NextBioi69267.

Family and domain databases

Gene3Di1.20.80.10. 1 hit.
InterProiIPR022408. Acyl-CoA-binding_prot_CS.
IPR000582. Acyl-CoA-binding_protein.
IPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
[Graphical view]
PfamiPF00887. ACBP. 1 hit.
[Graphical view]
PRINTSiPR00689. ACOABINDINGP.
SUPFAMiSSF47027. SSF47027. 1 hit.
PROSITEiPS00880. ACB_1. 1 hit.
PS51228. ACB_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: ThalamusImported.

Entry informationi

Entry nameiB4DJP3_HUMAN
AccessioniPrimary (citable) accession number: B4DJP3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: February 4, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.