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B4DIC4

- B4DIC4_HUMAN

UniProt

B4DIC4 - B4DIC4_HUMAN

Protein
Submitted name:

cDNA FLJ52195, highly similar to LIM and SH3 domain protein 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. zinc ion binding Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ52195, highly similar to LIM and SH3 domain protein 1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    PTM / Processingi

    Proteomic databases

    PRIDEiB4DIC4.

    Structurei

    3D structure databases

    ProteinModelPortaliB4DIC4.
    SMRiB4DIC4. Positions 1-67.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 LIM zinc-binding domain.UniRule annotation

    Keywords - Domaini

    LIM domainUniRule annotationSAAS annotation

    Family and domain databases

    Gene3Di2.10.110.10. 1 hit.
    InterProiIPR000900. Nebulin_repeat.
    IPR001781. Znf_LIM.
    [Graphical view]
    PfamiPF00412. LIM. 1 hit.
    PF00880. Nebulin. 1 hit.
    [Graphical view]
    SMARTiSM00132. LIM. 1 hit.
    [Graphical view]
    PROSITEiPS00478. LIM_DOMAIN_1. 1 hit.
    PS50023. LIM_DOMAIN_2. 1 hit.
    PS51216. NEBULIN. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4DIC4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNPNCARCGK IVYPTEKVNC LDKFWHKACF HCETCKMTLN MKNYKGYEKK    50
    PYCNAHYPKQ SFTMVADTPE NLRLKQQSEL QSQVRYKEEF EKNKGKGFSV 100
    VADTPELQRS SLGFLWNEIP PSPHL 125
    Length:125
    Mass (Da):14,598
    Last modified:September 23, 2008 - v1
    Checksum:i900F5D3C3D145534
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK295522 mRNA. Translation: BAG58436.1.
    RefSeqiNP_001258537.1. NM_001271608.1.
    UniGeneiHs.741156.

    Genome annotation databases

    GeneIDi3927.
    KEGGihsa:3927.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK295522 mRNA. Translation: BAG58436.1 .
    RefSeqi NP_001258537.1. NM_001271608.1.
    UniGenei Hs.741156.

    3D structure databases

    ProteinModelPortali B4DIC4.
    SMRi B4DIC4. Positions 1-67.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B4DIC4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 3927.
    KEGGi hsa:3927.

    Organism-specific databases

    CTDi 3927.

    Miscellaneous databases

    GenomeRNAii 3927.
    NextBioi 35472241.

    Family and domain databases

    Gene3Di 2.10.110.10. 1 hit.
    InterProi IPR000900. Nebulin_repeat.
    IPR001781. Znf_LIM.
    [Graphical view ]
    Pfami PF00412. LIM. 1 hit.
    PF00880. Nebulin. 1 hit.
    [Graphical view ]
    SMARTi SM00132. LIM. 1 hit.
    [Graphical view ]
    PROSITEi PS00478. LIM_DOMAIN_1. 1 hit.
    PS50023. LIM_DOMAIN_2. 1 hit.
    PS51216. NEBULIN. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "NEDO human cDNA sequencing project focused on splicing variants."
      Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
      , Sugano S., Nomura N., Isogai T.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: HippocampusImported.

    Entry informationi

    Entry nameiB4DIC4_HUMAN
    AccessioniPrimary (citable) accession number: B4DIC4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.