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B4DIC4 (B4DIC4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG58436.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length125 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 LIM zinc-binding domain. RuleBase RU000350

Ontologies

Keywords
   DomainLIM domain SAAS SAAS001781 RuleBase RU000350
   LigandMetal-binding
Zinc
Gene Ontology (GO)
   Molecular_functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4DIC4 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 900F5D3C3D145534

FASTA12514,598
        10         20         30         40         50         60 
MNPNCARCGK IVYPTEKVNC LDKFWHKACF HCETCKMTLN MKNYKGYEKK PYCNAHYPKQ 

        70         80         90        100        110        120 
SFTMVADTPE NLRLKQQSEL QSQVRYKEEF EKNKGKGFSV VADTPELQRS SLGFLWNEIP 


PSPHL 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Hippocampus EMBL BAG58436.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK295522 mRNA. Translation: BAG58436.1.
RefSeqNP_001258537.1. NM_001271608.1.
UniGeneHs.741156.

3D structure databases

ProteinModelPortalB4DIC4.
SMRB4DIC4. Positions 1-67.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB4DIC4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3927.
KEGGhsa:3927.

Organism-specific databases

CTD3927.

Family and domain databases

Gene3D2.10.110.10. 1 hit.
InterProIPR000900. Nebulin_repeat.
IPR001781. Znf_LIM.
[Graphical view]
PfamPF00412. LIM. 1 hit.
PF00880. Nebulin. 1 hit.
[Graphical view]
SMARTSM00132. LIM. 1 hit.
[Graphical view]
PROSITEPS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
PS51216. NEBULIN. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi3927.
NextBio35472241.

Entry information

Entry nameB4DIC4_HUMAN
AccessionPrimary (citable) accession number: B4DIC4
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 22, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.