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Protein
Submitted name:

cDNA FLJ54601, highly similar to F-box/WD repeat protein 11

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

SignaLinkiB4DH70.

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ54601, highly similar to F-box/WD repeat protein 11Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

EPDiB4DH70.
MaxQBiB4DH70.
PaxDbiB4DH70.
PRIDEiB4DH70.

Expressioni

Gene expression databases

BgeeiB4DH70.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000265094.

Structurei

3D structure databases

ProteinModelPortaliB4DH70.
SMRiB4DH70. Positions 35-486.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini97 – 13539F-boxInterPro annotationAdd
BLAST
Domaini204 – 495292WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 F-box domain.UniRule annotation

Keywords - Domaini

RepeatUniRule annotation

Phylogenomic databases

eggNOGiKOG0281. Eukaryota.
ENOG410XTA8. LUCA.
HOGENOMiHOG000006638.
HOVERGENiHBG002521.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR021977. Beta-TrCP_D.
IPR001810. F-box_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12125. Beta-TrCP_D. 1 hit.
PF12937. F-box-like. 1 hit.
PF00400. WD40. 7 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM01028. Beta-TrCP_D. 1 hit.
SM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
SSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 5 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DH70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDQNEDESP KKNTLWQISN GTSSVIVSRK RPSEGNYQKE KDLCIKYFDQ
60 70 80 90 100
WSESDQVEFV EHLISRMCHY QHGHINSYLK PMLQRDFITA LPEQGLDHIA
110 120 130 140 150
ENILSYLDAR SLCAAELVCK EWQRVISEGM LWKKLIERMV RTDPLWKGLS
160 170 180 190 200
ERRGWDQYLF KNRPTDGPPN SFYRSLYPKI IQDIETIESN WRCGRHNLQR
210 220 230 240 250
IQCRSENSKG VYCLQYDDEK IISGLRDNSI KIWDKTSLEC LKVLTGHTGS
260 270 280 290 300
VLCLQYDERV IVTGSSDSTV RVWDVNTGEV LNTLIHHNEA VLHLRFSNGL
310 320 330 340 350
MVTCSKDRSI AVWDMASATD ITLRRVLVGH RAAVNVVDFD DKYIVSASGD
360 370 380 390 400
RTIKVWSTST CEFVRTLNGH KRGIACLQYR DRLVVSGSSD NTIRLWDIEC
410 420 430 440 450
GACLRVLEGH EELVRCIRFD NKRIVSGAYD GKIKVWDLQA ALDPRAPAST
460 470 480 490 500
LCLRTLVEHS GRVFRLQFDE FQIISSSHDD TILIWDFLNV PPSAQNETRS
510
PSRTYTYISR
Length:510
Mass (Da):58,765
Last modified:September 23, 2008 - v1
Checksum:iA1B3BC2C11792F1A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294956 mRNA. Translation: BAG58031.1.
RefSeqiXP_005265915.1. XM_005265858.1.
UniGeneiHs.484138.

Genome annotation databases

GeneIDi23291.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294956 mRNA. Translation: BAG58031.1.
RefSeqiXP_005265915.1. XM_005265858.1.
UniGeneiHs.484138.

3D structure databases

ProteinModelPortaliB4DH70.
SMRiB4DH70. Positions 35-486.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000265094.

Proteomic databases

EPDiB4DH70.
MaxQBiB4DH70.
PaxDbiB4DH70.
PRIDEiB4DH70.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi23291.

Organism-specific databases

CTDi23291.

Phylogenomic databases

eggNOGiKOG0281. Eukaryota.
ENOG410XTA8. LUCA.
HOGENOMiHOG000006638.
HOVERGENiHBG002521.

Enzyme and pathway databases

SignaLinkiB4DH70.

Miscellaneous databases

ChiTaRSiFBXW11. human.
GenomeRNAii23291.

Gene expression databases

BgeeiB4DH70.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR021977. Beta-TrCP_D.
IPR001810. F-box_dom.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12125. Beta-TrCP_D. 1 hit.
PF12937. F-box-like. 1 hit.
PF00400. WD40. 7 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM01028. Beta-TrCP_D. 1 hit.
SM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
SSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 5 hits.
PS50082. WD_REPEATS_2. 7 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiB4DH70_HUMAN
AccessioniPrimary (citable) accession number: B4DH70
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 8, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.