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Protein
Submitted name:

cDNA FLJ59199, highly similar to Parkin (EC 6.3.2.-)

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ59199, highly similar to Parkin (EC 6.3.2.-)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiB4DGN4.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000355865.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 5150IBR-typeInterPro annotationAdd
BLAST
Domaini75 – 13157IBR-typeInterPro annotationAdd
BLAST

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiKOG0006. Eukaryota.
ENOG410YG4B. LUCA.
HOGENOMiHOG000013184.
HOVERGENiHBG053682.

Family and domain databases

InterProiIPR031127. E3_UB_ligase_RBR.
IPR002867. IBR_dom.
IPR003977. Parkin.
[Graphical view]
PANTHERiPTHR11685. PTHR11685. 1 hit.
PfamiPF01485. IBR. 2 hits.
[Graphical view]
PRINTSiPR01475. PARKIN.
SMARTiSM00647. IBR. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DGN4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGVLCPRPG CGAGLLPEPD QRKVTCEGGN GLGCGFAFCR ECKEAYHEGE
60 70 80 90 100
CSALFEASGT TTQAYRVDER AAEQARWEAA SKETIKKTTK PCPRCHVPVE
110 120 130
KNGGCMHMKC PQPQCRLEWC WNCGCEWNRV CMGDHWFDV
Length:139
Mass (Da):15,408
Last modified:September 23, 2008 - v1
Checksum:iBEA387AFC17AC00B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294684 mRNA. Translation: BAG57845.1.
UniGeneiHs.132954.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294684 mRNA. Translation: BAG57845.1.
UniGeneiHs.132954.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000355865.

Proteomic databases

PaxDbiB4DGN4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0006. Eukaryota.
ENOG410YG4B. LUCA.
HOGENOMiHOG000013184.
HOVERGENiHBG053682.

Family and domain databases

InterProiIPR031127. E3_UB_ligase_RBR.
IPR002867. IBR_dom.
IPR003977. Parkin.
[Graphical view]
PANTHERiPTHR11685. PTHR11685. 1 hit.
PfamiPF01485. IBR. 2 hits.
[Graphical view]
PRINTSiPR01475. PARKIN.
SMARTiSM00647. IBR. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB4DGN4_HUMAN
AccessioniPrimary (citable) accession number: B4DGN4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 8, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.