Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

cDNA FLJ59199, highly similar to Parkin (EC 6.3.2.-)

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ubiquitin-protein transferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ59199, highly similar to Parkin (EC 6.3.2.-)Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: InterPro
  2. mitochondrion Source: InterPro
Complete GO annotation...

Family & Domainsi

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

HOGENOMiHOG000013184.
HOVERGENiHBG053682.

Family and domain databases

InterProiIPR003977. Parkin.
IPR002867. Znf_C6HC.
[Graphical view]
PfamiPF01485. IBR. 2 hits.
[Graphical view]
PRINTSiPR01475. PARKIN.
SMARTiSM00647. IBR. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DGN4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGGVLCPRPG CGAGLLPEPD QRKVTCEGGN GLGCGFAFCR ECKEAYHEGE
60 70 80 90 100
CSALFEASGT TTQAYRVDER AAEQARWEAA SKETIKKTTK PCPRCHVPVE
110 120 130
KNGGCMHMKC PQPQCRLEWC WNCGCEWNRV CMGDHWFDV
Length:139
Mass (Da):15,408
Last modified:September 23, 2008 - v1
Checksum:iBEA387AFC17AC00B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294684 mRNA. Translation: BAG57845.1.
UniGeneiHs.132954.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294684 mRNA. Translation: BAG57845.1.
UniGeneiHs.132954.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOGENOMiHOG000013184.
HOVERGENiHBG053682.

Miscellaneous databases

NextBioi35471797.

Family and domain databases

InterProiIPR003977. Parkin.
IPR002867. Znf_C6HC.
[Graphical view]
PfamiPF01485. IBR. 2 hits.
[Graphical view]
PRINTSiPR01475. PARKIN.
SMARTiSM00647. IBR. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiB4DGN4_HUMAN
AccessioniPrimary (citable) accession number: B4DGN4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 1, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.