B4DGN4 (B4DGN4_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: cDNA FLJ59199, highly similar to Parkin (EC 6.3.2.-) EMBL BAG57845.1
Organism	Homo sapiens (Human) EMBL BAG57845.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	139 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 IBR-type zinc finger. SAAS SAAS002867

Ontologies

Keywords
Domain	Zinc-finger SAAS SAAS002867
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Biological_process	protein ubiquitination Inferred from electronic annotation. Source: GOC
Cellular_component	cytosol Inferred from electronic annotation. Source: InterPro mitochondrion Inferred from electronic annotation. Source: InterPro
Molecular_function	ubiquitin-protein ligase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4DGN4 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: BEA387AFC17AC00B	FASTA	139	15,408
	10 20 30 40 50 60 MGGVLCPRPG CGAGLLPEPD QRKVTCEGGN GLGCGFAFCR ECKEAYHEGE CSALFEASGT 70 80 90 100 110 120 TTQAYRVDER AAEQARWEAA SKETIKKTTK PCPRCHVPVE KNGGCMHMKC PQPQCRLEWC 130 WNCGCEWNRV CMGDHWFDV

References

[1]

"NEDO human cDNA sequencing project focused on splicing variants." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Brain EMBL BAG57845.1.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK294684 mRNA. Translation: BAG57845.1.
IPI	IPI00470428.
UniGene	Hs.132954.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOGENOM	HOG000013184.
HOVERGEN	HBG053682.
Family and domain databases
InterPro	IPR003977. Parkin. IPR002867. Znf_C6HC. [Graphical view]
PANTHER	PTHR11685:SF2. PTHR11685:SF2. 1 hit.
Pfam	PF01485. IBR. 2 hits. [Graphical view]
PRINTS	PR01475. PARKIN.
SMART	SM00647. IBR. 2 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	35471797.

Entry information

Entry name

B4DGN4_HUMAN

Accession

Primary (citable) accession number: B4DGN4

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	April 3, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.