Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

cDNA FLJ53728, highly similar to TERF1-interacting nuclear factor 2

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ53728, highly similar to TERF1-interacting nuclear factor 2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: HPA
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiB4DFJ1.

Expressioni

Gene expression databases

BgeeiB4DFJ1.

Structurei

3D structure databases

ProteinModelPortaliB4DFJ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG057120.
KOiK11112.

Family and domain databases

InterProiIPR029400. TINF2_N.
[Graphical view]
PfamiPF14973. TINF2_N. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DFJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATPLVAGPA ALRFAAAASW QVVRGRCVEH FPRVLEFLRS LRAVAPGLVR
60 70 80 90 100
YRHHERLCMG LKAKTKQDLR KILEAQETFY QQVKQLSEAP VDLASKLQEL
110 120 130 140 150
EQEYGEPFLA AMEKLLFEYL CQLEKALPTP QAQQLQDVLS WMQPGVSITS
160 170 180 190 200
SLAWRQYGVD MGWLLPECSV TDSVNLAEPM EQNPPQQQRL ALHNPLPKAK
210 220 230 240 250
PGTHLPQGPS SRTHPEPLAG RHFNLAPLGR RRVQSQWAST RGGHKERPTV
260 270 280 290 300
MLFPFRNLGS PTQVISKPES KEEHAIYTAD LAMGTRAAST GKSKSPCQTL
310 320 330 340 350
GGRALKENPV DLPATEQKEN CLDCYMDPLR LSLLPPRARK PVCPPSLCSS
360 370 380 390 400
VITIGDLVLD SDEEENGQGE GKESLENYQK TKFDTLIPTL CEYLPPSGHG
410
AIPVSSCDCR DSSRPL
Length:416
Mass (Da):46,126
Last modified:September 23, 2008 - v1
Checksum:i251E7479EDF9E233
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294119 mRNA. Translation: BAG57452.1.
RefSeqiXP_005267586.1. XM_005267529.2.
UniGeneiHs.496191.

Genome annotation databases

GeneIDi26277.
KEGGihsa:26277.
UCSCiuc010tof.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK294119 mRNA. Translation: BAG57452.1.
RefSeqiXP_005267586.1. XM_005267529.2.
UniGeneiHs.496191.

3D structure databases

ProteinModelPortaliB4DFJ1.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB4DFJ1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi26277.
KEGGihsa:26277.
UCSCiuc010tof.2. human.

Organism-specific databases

CTDi26277.

Phylogenomic databases

HOVERGENiHBG057120.
KOiK11112.

Miscellaneous databases

GenomeRNAii26277.
NextBioi35471504.

Gene expression databases

BgeeiB4DFJ1.

Family and domain databases

InterProiIPR029400. TINF2_N.
[Graphical view]
PfamiPF14973. TINF2_N. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Alzheimer cortexImported.

Entry informationi

Entry nameiB4DFJ1_HUMAN
AccessioniPrimary (citable) accession number: B4DFJ1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 29, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.